DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and CG14856

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_650391.1 Gene:CG14856 / 41790 FlyBaseID:FBgn0038261 Length:557 Species:Drosophila melanogaster


Alignment Length:608 Identity:154/608 - (25%)
Similarity:240/608 - (39%) Gaps:96/608 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AFDLDDLLPTIGEFGKYQKLL--VFGICLPACIPCGFCA----FNQLFMADTPDDYWCRIPELLD 91
            |.|.|::|...|:..:||.:|  ::|:.:       |..    |.|..:...| |:||...:   
  Fly     2 AMDFDEILVKCGDSHRYQYMLLALYGLLM-------FIVSRHYFAQNVIGFVP-DHWCYHEQ--- 55

  Fly    92 LPLEQRKSLSIPKELDNDELVYS-----KCYTYGVNWTQLLESGEEDDLTT--MEPNASWPLIKC 149
              ||.|....|       ..:|:     .|       |:|.....:....|  .||        |
  Fly    56 --LENRSYAEI-------AAIYAPFKRPSC-------TRLASINMDGSNATASSEP--------C 96

  Fly   150 PQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLA 214
            .: |.|:....:.|:..|.:.|||......:|.:....|...|..|||||.||.||..:..:...
  Fly    97 NR-WIYHYDHGFISMNADLNWVCDDAYKARVGQSLFFVGSMCGTLLFGLLGDRIGRIKAVVLANC 160

  Fly   215 TLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSF-VTVMTCTFYTSGI 278
            ....|...|..::...|::.||.:.||...|...:.||:.||.|....||. :.:..|.||..|:
  Fly   161 CGFLGDSATIFAETLLTFSASRFVSGLAAEANSYLMFILVLEYVSPTMRSVGLNLTMCVFYGLGM 225

  Fly   279 MLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREF 343
            :..|........|......|:||......:.|::.||.:||:.|...:.|...|.|:||.|.|:.
  Fly   226 ICASWQGVWLGSWRSFMVWTALPQLLVTGFYFLIQESAQWLVTRQDFDGAELRLRRVAKFNRRDV 290

  Fly   344 PEA------VHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGL 402
            .||      .|.|.:....|.::..||:    ..|.|..:.|.:||:.|.:|:.:......|..:
  Fly   291 SEADYELFRQHCKTKESEARSQMSMQKQ----ARLIDSFKLPRLRLRLIYVTVVFSIVTLCYNTM 351

  Fly   403 SYYGPALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVD 467
            |.....|..:.:|.|.|.|:...||.:........:||::...:||...|:....|.:|      
  Fly   352 SRNVEGLSISPFVMFSLFALTLPPSGIFQTQVQKHFGRKFTSVVSMTATGLMTATTGIL------ 410

  Fly   468 ETLVLYLVSKALLSASFLIIYPF------------AGELYPTQVRGIGI-------GASSYIGGL 513
              |..:....|.:....|::..|            :.||.||.||..|:       .|.|:|.  
  Fly   411 --LAFWTQHSATVMVCLLLMCRFGISVTTGSTMQISTELMPTCVRSSGLAVIHVTAAALSFIS-- 471

  Fly   514 GLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCC 578
                 |||.:|.........:|...|.::.....|.|.||.:.:||.|:.|||||||..:..|..
  Fly   472 -----PFILHLDTYFRAASSIITCILLLVSAWICLLLSETRNKKLPLTLAEGEEFGKGERMFDFM 531

  Fly   579 RCAQKPEILSQPASYENLDVLAG 601
            |..:|.:  ....|.:.::.|.|
  Fly   532 RSFKKAD--QHDLSADTIEKLMG 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 136/555 (25%)
MFS 182..551 CDD:119392 99/394 (25%)
CG14856NP_650391.1 2A0119 13..514 CDD:273328 136/555 (25%)
MFS 129..503 CDD:119392 99/392 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
33.010

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