DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and CG14855

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_650390.2 Gene:CG14855 / 41789 FlyBaseID:FBgn0038260 Length:556 Species:Drosophila melanogaster


Alignment Length:567 Identity:148/567 - (26%)
Similarity:244/567 - (43%) Gaps:81/567 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DLDDLLPTIGEFGKYQKLL--VFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPLEQR 97
            |.:::|...|...:||.:|  ::|..:   :......|:|..::..| |:||...:     ||.|
  Fly     2 DFEEILAKCGNSSRYQFVLLALYGYLM---VVVSMHYFSQNVISFVP-DHWCYHEQ-----LENR 57

  Fly    98 KSLSIPKELDNDELVYSK-----CYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQGWEYNT 157
            ....|.|       :||:     |       |:|.:..|:....|:...      :|.: |.|..
  Fly    58 SFAEIEK-------IYSQFEKPSC-------TRLEKIDEDGQNHTLSRE------RCNR-WIYKY 101

  Fly   158 SVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVC--------LA 214
            ...:.|:..:.:.|||:.....:|.:....|...|...||||.||.||..:..:.        .:
  Fly   102 DFGYKSMNTELNWVCDEAYKARVGQSLFFVGSVCGTLAFGLLGDRIGRIRALILANWCGFLGDFS 166

  Fly   215 TLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSF-VTVMTCTFYTSGI 278
            |:.|||| ||.|.       ||.|.||...|...:.:|:.||.|..:.|:. :..:..:||..|:
  Fly   167 TIFAGSL-TSFSI-------SRFISGLAADANSYLMYILILEYVSPSLRNVGLNTVLGSFYCLGL 223

  Fly   279 MLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREF 343
            :....:......|......:|:|.....|:.|::.||.:||:.|..::.|::.|||:||:|.|:.
  Fly   224 IGACWLAVWVGHWRIFLACSSVPLLLVTLFYFLVQESAQWLVTRNDVDGAIRRLERVAKINRRQV 288

  Fly   344 PEA----VHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSY 404
            .:.    ..:..|...|:||.:::..|     |.|:.:||.||.....:.|.:......|..::.
  Fly   289 ADKDFKDFRIYCEQHYRKDKNQEEHAK-----LLDMLKTPRMRSTAFKLLLIFIIIVPCYNTIAR 348

  Fly   405 YGPALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRR-----WPLSLSMILGGVACVITVMLPDD 464
            ....||.:.::.|.|:|:...||........|..||:     |     |.:.|:..|...::...
  Fly   349 NVEGLGISPFIMFSLNALTLPPSGYLQGLLQDRMGRKATAVGW-----MAITGIFAVAAGLVISQ 408

  Fly   465 AVDETLVLYLVSKALLSASFLIIY------PFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITY 523
            ..:.. ||.||. ..::|.|.:..      .|:.||.||.|||.|:......|.......|:|.:
  Fly   409 GSNRN-VLLLVG-LTMAARFGVSIADGASSQFSTELIPTSVRGRGVAVVHVAGFAASFLSPYILH 471

  Fly   524 LGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGK 570
            ||......|.:|:|.|.:.|....|.||||.:.:||.::.||||||:
  Fly   472 LGTYYKPAPSIILGLLFLSGAYVCLLLPETRNKKLPMSLAEGEEFGR 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 110/422 (26%)
xylE <306..>342 CDD:182225 14/35 (40%)
CG14855NP_650390.2 2A0119 11..507 CDD:273328 138/545 (25%)

Return to query results.
Submit another query.