DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and slc22a4

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:599 Identity:166/599 - (27%)
Similarity:278/599 - (46%) Gaps:68/599 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPLEQRKS 99
            |.||:...:|.:|.:| |.||.....:.:|.||.....:|:.||| .:.|.|||.:::....|.:
Zfish     3 DYDDITSFLGTWGPFQ-LTVFLALAISILPNGFVGLYIVFVGDTP-AHECLIPEQINISSVWRDA 65

  Fly   100 LSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIK-----CPQGWEYNTSV 159
             :||.::.:..|..|.|..|.::..:.|      .:....||....|.:     |..||.|:...
Zfish    66 -AIPTQMQDGVLKRSSCSRYRLDTLRQL------SMLNYTPNVEVNLSQIETEPCVDGWSYSQEF 123

  Fly   160 VWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTS 224
            ..|:||.::||||:::....:..:....|..||.:|.|.::||.|||...|..:|......|:..
Zfish   124 YQSTIVTEWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFTMMALQTITILIQM 188

  Fly   225 LSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGV----- 284
            .|..:..::.....||.:..:.|.:.:::..|::....|       ..|.:.|:.:.||:     
Zfish   189 FSPSWEVFSAIYFFVGFSGFSNYVVAYVLGSEILSPASR-------VLFGSLGVFMGSGIGQMFF 246

  Fly   285 ---TYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEA 346
               .|..|.|..|....:|....||...:.:||||||||.:||..||..:|.|.|:.|....||.
Zfish   247 PLAAYFIRSWRWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKNRVTAPEV 311

  Fly   347 VHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILI-TLSWFANETVYLGLSYYGPALG 410
            :....|.:      :..||::....:.|:....| .:.|||| :|.|     :.:.:|||...|.
Zfish   312 IFSSSEIE------EAAKKRIQKHSILDILSNCN-AVSTILICSLLW-----MVITMSYYALILN 364

  Fly   411 T-----NQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETL 470
            |     |.|::||||||||:|:|:.....:....||...:.:::|||....|..::|.:......
Zfish   365 TTNLHGNPYLNFFLSAVVEVPAYIIAALLLRFCSRRICQASTLLLGGALIFIIQLIPTELQGLAT 429

  Fly   471 VLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVI 535
            .|.::.|..::|:|.::|....||:||.||.:.:|:.|....:|.|..|||.|||.....:|.::
Zfish   430 ALEMLGKLCVTAAFCVVYAVTSELFPTVVRNMAMGSCSMTARIGSIISPFIIYLGNYYRYIPYIV 494

  Fly   536 MGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCCRCAQKPEILSQPASYENLDVLA 600
            :|.|::..|:..|.|||:....||:||.:.:      ..:...||.:.|               |
Zfish   495 IGGLALFSGVMSLLLPESKGKVLPETIAQMQ------SVRGLRRCRKPP---------------A 538

  Fly   601 GSSTNASEVELELR 614
            .|:.:.|:|..|::
Zfish   539 ASTEDKSKVLQEVK 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 119/412 (29%)
xylE <306..>342 CDD:182225 17/35 (49%)
slc22a4NP_957143.1 MFS_SLC22A4_5_OCTN1_2 106..510 CDD:340934 120/422 (28%)

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