DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and F23F12.13

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001033356.1 Gene:F23F12.13 / 3896740 WormBaseID:WBGene00044455 Length:528 Species:Caenorhabditis elegans


Alignment Length:417 Identity:102/417 - (24%)
Similarity:189/417 - (45%) Gaps:44/417 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 SIVIDFDLVCDQDIYPTIGLAALN-TGGPVGVYLFGLLNDRGGRR-LSYFVCLATLLAGSLMTSL 225
            |:|.||.:.|....|....:|.:. .|..:|...:|.|.|..||: :|:|.....:|.| :.:..
 Worm    80 SMVQDFKMFCGTKAYDAAWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFG-VASGF 143

  Fly   226 SKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGI--MLLSGVTYLE 288
            :..:..:|..|.|||.:|.::..:.:...||.:....|.|:.    :|:..|.  ::.:...::.
 Worm   144 APSWEVFAAFRFIVGTSIASILIVFYAYILEFIEPEQRVFLR----SFFNWGYARLVFTLACFIC 204

  Fly   289 RDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEA 353
            ..|...:..|||........:.::||||:|...:.|..:|....:|:|.::|..:.......:|.
 Worm   205 GYWRSAAIATSLLSLPILPVLLILPESPKWFNTKKRFRDARAAEKRVAWLSGIPYVNDEDQSIEI 269

  Fly   354 QIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYVSFF 418
            .   :||:::..|:..  :.||..:..:..:||::...||:......|.......|..|.|:|.|
 Worm   270 S---EKLEEKSTKIYT--MKDLFTSWTIAYRTIVVGSLWFSTSLSAFGSDLNSGNLAGNFYLSQF 329

  Fly   419 LSAVVELPSYLCCWYFMDTW----GRR----WPLSLSMILGGVACVITVM--LPDDAV----DET 469
            :|..|...:.:.. :.:||:    .||    :| .::|||  ..|||.|:  ||:...    ...
 Worm   330 VSGAVTAFAKIFV-FLLDTYVPSFDRRRLHQYP-QIAMIL--CYCVIMVLMILPESDCGSQGSRD 390

  Fly   470 LVLYLVSKALLSASFLII-----YPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNL 529
            |.:.:::  ::..||:.|     |..|.|.:||::|.||||..|.:...|.:..|.:.||.....
 Worm   391 LAIIIIN--IIGVSFIEITWDACYLVAVECFPTKIRTIGIGTCSLLARTGALLAPQMAYLSDIYR 453

  Fly   530 KLPLVI---MGFLSMLGGMTGLRLPET 553
            ..|..:   :|.:|:|  ::.:.||:|
 Worm   454 PAPYAVVCSIGTISLL--ISCVFLPDT 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 102/417 (24%)
MFS 182..551 CDD:119392 93/394 (24%)
F23F12.13NP_001033356.1 MFS 74..476 CDD:391944 99/413 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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