DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and CG5592

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster


Alignment Length:556 Identity:159/556 - (28%)
Similarity:273/556 - (49%) Gaps:46/556 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPLEQRKSLS 101
            ::.|..||:||.:||.|:|.: :||.....|..|.|:||...|.::|||:.||..||..::|:..
  Fly    10 ENFLLFIGDFGPFQKRLLFWM-MPAAFLFAFTYFGQIFMILLPKNHWCRVRELEGLPESEQKNRG 73

  Fly   102 IPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQGWEYN-TSVVWSSIV 165
            |||:.|..   :..|:.|.|.:         |...|.:.|.:...|.|..||.|: ..|.:.||.
  Fly    74 IPKKQDGS---FENCFMYNVPY---------DSNATNDANQTRSPIPCNNGWIYDRKEVPYESIA 126

  Fly   166 IDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSLSKDFW 230
            .:::.|||:..:.|..:.....|..||...||.:.|..||..:.|:..:..:.|..::.:.|||.
  Fly   127 TEYNWVCDKRDFGTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSVVCKDFP 191

  Fly   231 TWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCT-FYTSGIMLLSGVTYLERDWVRL 294
            .:|.||.:.||::...:...:|::||.||..||:.|..:..| |:|.|..||..:.|:..:|...
  Fly   192 CFAASRFVAGLSMNYCFVPIYILTLENVGIKYRTLVGNLALTFFFTLGACLLPWLAYVISNWRHY 256

  Fly   295 SYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKL----EAQI 355
            :.:.:||.....|...:.||||.||:..|:::..:::::..||.||:...|.|..::    |.:.
  Fly   257 AMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAAKANGKIISEEVWSEMRECYELKF 321

  Fly   356 RRDKLKKQKKKMANVGLADLCRT-PNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYVSFFL 419
            ..::|.||...:      ||.:| |.:.:.|||| ::|......|.........|.|:.:::|.|
  Fly   322 ANEQLGKQYTSL------DLFKTFPRLVVLTILI-VTWMTVALAYDAHVRVVEILDTDIFITFSL 379

  Fly   420 SAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASF 484
            |::||:|:.:.....:|..||:..:|..|:|...:.:...:|...        :..|.|.::|.|
  Fly   380 SSLVEIPAGIVPMLLLDRIGRKPMMSAVMLLCAASSLFVGILKGH--------WNASTAAIAARF 436

  Fly   485 LIIYPF------AGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLG 543
            .....:      |.|:.||.:||.|:...:.:|.:|.:..|.:....:....||:.|:..:|::|
  Fly   437 FATMAYNVGQQWASEILPTVLRGQGLAIINIMGQMGALLSPLVLSTHRYYRPLPMFIITLVSVIG 501

  Fly   544 GMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCCR 579
            .:..|.||||....:|||::|.|   |.|..:  ||
  Fly   502 ALIILFLPETKGATMPQTLDEAE---KRWTLR--CR 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 149/529 (28%)
MFS 182..551 CDD:119392 99/380 (26%)
CG5592NP_647996.1 2A0119 17..519 CDD:273328 149/529 (28%)
MFS 141..509 CDD:119392 99/382 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I1789
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
65.960

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