DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and Slc22a14

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001032838.1 Gene:Slc22a14 / 382113 MGIID:2685974 Length:629 Species:Mus musculus


Alignment Length:689 Identity:160/689 - (23%)
Similarity:285/689 - (41%) Gaps:159/689 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RQRHKPE-SQPSVDEAFDL------------DD----LLPTIGEFGKYQKLLVFGICLPACIPCG 66
            |..|:.| |.||.:.:.::            ||    ::..|||||.:|..||....:|:.:.. 
Mouse    17 RDTHRHEISFPSQNWSLEMLLRRLKAIDARRDDKFASVMDAIGEFGTFQWRLVVLTFIPSILST- 80

  Fly    67 FCAFNQLFMADTPDDYWCRIPELLD----LPLEQRKSLSIPK---------------ELDNDELV 112
            |..|:..|:......| |....:|:    |..:::.:|::|:               ..|.|.::
Mouse    81 FFIFSHHFLLTAQRPY-CNTSWILEVGPNLTEDEQLNLTLPRAPNGSFLTCLMYIPVPWDLDSII 144

  Fly   113 YSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQGWEYNTSVVWSSIVIDFDLVCDQDIY 177
            :     :|:|:|:                      .|..||.|..:.. .|::.:|||||..:..
Mouse   145 H-----FGLNYTE----------------------TCKFGWIYPFAHT-RSLINEFDLVCGNEPN 181

  Fly   178 PTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLM----TSLSKDFWTWAGSRVI 238
            ...||....:|...|..|||.|:|:.||   |.:.|.:|| |.|:    |:....|:.:...|..
Mouse   182 KENGLTVFLSGVLTGSLLFGFLSDKLGR---YPIILLSLL-GFLIFGFGTAFVSSFYQYLFFRFF 242

  Fly   239 -----VGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLERDWVRLSYIT 298
                 ||..|.:|    .::...|||| :|:...::..:|.|.|::||:|:.|....|..|..:.
Mouse   243 VAQASVGYAICSV----SLVMEWLVGE-HRAQAVILQHSFLTIGVILLTGLAYKVVHWRLLCLLG 302

  Fly   299 SLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEAQIRRDKLKKQ 363
            .:|.:.....::|:.||||||::||::|||.|:|...|:||.:..|  ::|..|.||       .
Mouse   303 GMPMFPLICNIWVLRESPRWLMVRGKVEEAKKVLCYAAEVNKKTIP--LNLLNELQI-------S 358

  Fly   364 KKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYVSFFLSAVVELPSY 428
            .||:|...:.|.|...::....:.|...||....:...|:......|.:.|....:.::|.:|:.
Mouse   359 GKKVAKASILDFCTNQHLFKVVLAIGCVWFTVSYISFTLNLKMNDFGLDVYFVQMVRSIVAVPAR 423

  Fly   429 LCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASFLIIYPFAGE 493
            |||...::.:||:|.|:|::.|....|:..:.||.:.....::..::::..::.:..|.:.:..|
Mouse   424 LCCIILLEYFGRKWALNLTLFLVTSMCLFLLFLPQEPKSTIILTLMLAEFSMAGTLSIFFIYTAE 488

  Fly   494 LYPTQVRGIGIGASS--YIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHH 556
            |.||.:|..|:|..|  ::.|    .|..:....:...:||:..                     
Mouse   489 LLPTVLRSTGLGMVSLAWVAG----AISSVAIFKQTKTQLPIFF--------------------- 528

  Fly   557 RLPQTIEEGEEFGKNWQFKDCCRCAQKPEILSQPASYENLDVLAGSSTNASEVELELRDSRRVRE 621
                                ||.|.    :|:  ..:.:|....||.:....:|..:|||   .|
Mouse   529 --------------------CCLCC----VLA--LCFSSLVPETGSQSLRDSIEYNIRDS---IE 564

  Fly   622 PAPRIDERTPLDTTASGSGRPVHRPSMKRLVRQMSVMDT 660
            |..| ::..|:         .:...||..:|....|.:|
Mouse   565 PKDR-NKDVPM---------VIAEESMSDIVADSEVTNT 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 131/546 (24%)
MFS 182..551 CDD:119392 98/379 (26%)
Slc22a14NP_001032838.1 2A0119 59..553 CDD:273328 138/592 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

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