DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and CG31106

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_733086.2 Gene:CG31106 / 318594 FlyBaseID:FBgn0051106 Length:513 Species:Drosophila melanogaster


Alignment Length:626 Identity:121/626 - (19%)
Similarity:213/626 - (34%) Gaps:223/626 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KPESQPSVDEAFDLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIP 87
            ||:|..|.....:.:|:|..|| ||:.|.:::|...|                            
  Fly    13 KPKSARSTSAGHEYEDVLQIIG-FGRVQWIVLFAAGL---------------------------- 48

  Fly    88 ELLDLPLEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQG 152
             ||.:.:.:                     |.|:::..::.                   :|   
  Fly    49 -LLMMVINE---------------------TMGMSYITIVS-------------------QC--- 69

  Fly   153 WEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGV----YLFGLLNDRGGRRLSYFVCL 213
                          ||::       .::..|.::....:|:    |.:|.|:|..|||.   |.:
  Fly    70 --------------DFEM-------NSMDKAVMSAASFIGIFCSSYFWGYLSDTIGRRP---VLI 110

  Fly   214 ATLLAG---SLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLEL-------VGENYRS-FVT 267
            .|.:||   ||.:::..::|.:...|..||..|.......:....|.       :..||.| ||.
  Fly   111 YTTIAGNFLSLCSTVIPNYWLYVFIRFGVGFFIAGASSTTYAYLGEFFTPRHRPIAINYASLFVG 175

  Fly   268 VMTCTFYTSGIMLLS-----GVT--YLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRL 325
            |.|.....:..::||     .:|  :..|.|..|:....||.....|.::.:||||:.|:...:.
  Fly   176 VSTVYVPATAWLILSMDWSVSITDGFSLRPWRLLTICYLLPGVVGTLMLWSLPESPKILMSLHKT 240

  Fly   326 EEALKILERMAKVN-GREFPE-AVH-LKLEAQIRRDK-----------LKKQKKKMANVGLADLC 376
            |||...::.:|..| |:...| .|| ||.|.....:.           :||..|:     ...|.
  Fly   241 EEAFAAVDWIAVTNSGKHLHEFKVHKLKTEDNANGENILLISKSAFTTIKKMWKE-----TLPLL 300

  Fly   377 RTPNMRLKTILITLSWFANETVYLGLSYYGPALG------------------------------- 410
            |.|::        |::..:.|:..||.:....:|                               
  Fly   301 RRPHL--------LNFVISCTIMCGLFFSSSGMGLWYPEIQNRLGSNAADDSMTVCQVIDASIDQ 357

  Fly   411 ---------------TNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVM 460
                           |..|:.........:..|:.....::|.||:..:|:.:.|.|...:..:.
  Fly   358 MQANASNKICDDHINTKSYIDTITYGSALIVGYILMGLVINTIGRKASISIGLTLAGACAIALIF 422

  Fly   461 LPDD-AVDETLVLYLVSKAL----LSASFLIIYPFAGELYPTQVRG------IGIGASSYIGGLG 514
            :.|: |:.....||||...|    ||.:.:       :|.||.:||      :.:|.:..:.|..
  Fly   423 IKDEVAIVVCFCLYLVLPGLCVSILSGAVV-------DLVPTHLRGKAVCICLMLGRTGSVFGSN 480

  Fly   515 LIGIPFITY----LGKDNLKLPLVIMGFLSMLGGMTGLRLP 551
            :||:...:|    .|        |..||:.:...:| |.||
  Fly   481 IIGVLLESYCSLTFG--------VFSGFVLVCASLT-LLLP 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 114/605 (19%)
MFS 182..551 CDD:119392 99/465 (21%)
CG31106NP_733086.2 2A0115 37..486 CDD:273327 102/564 (18%)
MFS 40..512 CDD:119392 108/596 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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