DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and CG3168

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_572345.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster


Alignment Length:555 Identity:116/555 - (20%)
Similarity:208/555 - (37%) Gaps:135/555 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 QRKSLSIPKE----LDNDELVYSKCYTYG------VNWTQLLESGEEDDLTTME---PNASWPLI 147
            ::||:.:|:.    :.|.|.....| .||      :....|:.:.||.|:.:|.   |:|...| 
  Fly   120 RKKSVPLPEPTAPIVANFERAIELC-GYGKFHYILLAICGLVSTSEEMDVISMSFILPSAECDL- 182

  Fly   148 KCPQGWEYNTSVV-WSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFV 211
                  :.||... |.:.:|            .||:.       ||.|.:|.:.|..||:....|
  Fly   183 ------DLNTETKGWLNSII------------FIGMM-------VGAYFWGSIADSFGRKKVLIV 222

  Fly   212 -------CLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVM 269
                   |:       :.:|.|:.:..:...|.:.|..:.....:.:....|...:..|..:...
  Fly   223 ISFMNAFCI-------VASSFSQTYSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKRGSMLSF 280

  Fly   270 TCTFYTSGIMLLSGVTYL--------------ERDWVRLSYITSLPFYAYFLYMFVMPESPRWLL 320
            ...|:|.|.:.::.:.:|              ...|.....:.|||.:.....:|.:||||::||
  Fly   281 MAAFWTFGNLFVASLAWLIIPRTIGFTTPYFTYNSWRIFLLVCSLPSFLVGFLLFYLPESPKFLL 345

  Fly   321 MRGRLEEALKILERMAKVNGREFPE---AVHLKLEAQI--RRDKLKKQKKKMANVGLAD----LC 376
            .||:.:.||.|...:...|.:..|:   ...|:::.::  ....:|.:..:|.: |:.|    |.
  Fly   346 TRGKKDRALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGNVKNKYSRMIS-GMVDHSRALF 409

  Fly   377 RTPNMRLKTILITLSWFANETVYLGLSYYG-----PAL-------------------GTNQYV-- 415
            ::|.:|...:.||:    |.|.::|  |||     |.|                   ....||  
  Fly   410 KSPILRFTIVSITI----NFTFHIG--YYGLLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVN 468

  Fly   416 -----------------SFFLSAVVE----LPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITV 459
                             |.|:.:::.    ||:.|.....||..||::.|....:..|:...:..
  Fly   469 LAKEQSNNGTCSSDIPQSVFMESLISLASALPANLLAILGMDMLGRKFFLIAGTMTAGICSALMY 533

  Fly   460 MLPDDAVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGL-GLIGIPFITY 523
            .:....  :.||:..:....:||:...:.....|::||::|..|:..|.....| |:||...|..
  Fly   534 FVRSSV--QNLVVSAIFSGAISAANAALDCLITEVFPTKLRATGVAISMVAARLGGIIGNIVIAQ 596

  Fly   524 LGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRL 558
            |..:....|..|:..|.:.||:..|.||.|....|
  Fly   597 LLDNYCPSPTFIVSGLLIGGGLMCLLLPNTTRKEL 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 96/477 (20%)
xylE <306..>342 CDD:182225 13/35 (37%)
CG3168NP_572345.1 synapt_SV2 <137..626 CDD:130366 110/531 (21%)

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