DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and Slc22a15

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001101177.1 Gene:Slc22a15 / 310732 RGDID:1311184 Length:548 Species:Rattus norvegicus


Alignment Length:565 Identity:155/565 - (27%)
Similarity:246/565 - (43%) Gaps:87/565 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VDEAFDLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMAD----------TPDDYWC 84
            |:|||.      .:||.|.||..|.|.:.:          ..||::|.          ||..:| 
  Rat     3 VEEAFQ------AVGEMGLYQMYLCFLLAV----------LLQLYVATEAILIALIGATPAYHW- 50

  Fly    85 RIPELLDLPLEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKC 149
            .:.||  ||.:...:.|           ..|...:| :|. |..:|.|........|:       
  Rat    51 DMAEL--LPNQSHSNQS-----------SGKGQAFG-DWL-LTANGSEIHKHVHFSNS------- 93

  Fly   150 PQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLA 214
                       ::||..::.|:.::....:...:...:|..|||..||.|:||.||:..|....|
  Rat    94 -----------FTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFA 147

  Fly   215 TLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIM 279
            ..:..::....|..:..:|.:|.:||:....:..:.|::..|.||..|.:....:...|:..||.
  Rat   148 LDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGAAYWALAGSIGGLFFAVGIA 212

  Fly   280 LLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFP 344
            ..:.:.|..|.|..|:.:.:|.....||....:|||||||..:|||.||.:.|..:||.|.:   
  Rat   213 QYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRK--- 274

  Fly   345 EAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPAL 409
                ||....:.....:..::   .....||.|...:...|:::...||....||.||:.....|
  Rat   275 ----LKCTFSLTHPANRSYRE---TGSFLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDL 332

  Fly   410 GTNQYVSFFLSAVVELPSY-LCCWYFMDTW-GRRWPLSLSMILGGVACVITVMLPDD------AV 466
            |.:.|.:..||.::|:||| ||.:.....| ||:..|:..:.|||:||:|.:.||:.      ||
  Rat   333 GGSIYANLALSGLIEIPSYPLCIYLINQRWFGRKRTLAAFLCLGGLACLIVMFLPEKKDTGVFAV 397

  Fly   467 DETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKL 531
            ..:..|.|:.|..:||:|.|:|.:..|||||.:|.:|:|..|....:|.|..||:..|......|
  Rat   398 VNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFVPSLKDVQWSL 462

  Fly   532 PLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEE---------GEE 567
            |.::.|...:..|:..|.|||||:..|.:|..:         |||
  Rat   463 PFIVFGATGLTSGLLSLLLPETLNSPLLETFSDLQMYSYRRLGEE 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 147/534 (28%)
MFS 182..551 CDD:119392 113/376 (30%)
Slc22a15NP_001101177.1 MFS 111..469 CDD:119392 110/367 (30%)
MFS_1 111..450 CDD:284993 105/348 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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