DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and SPOM_SPAPB1E7.08C

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_594134.1 Gene:SPOM_SPAPB1E7.08C / 2543660 PomBaseID:SPAPB1E7.08C Length:554 Species:Schizosaccharomyces pombe


Alignment Length:594 Identity:123/594 - (20%)
Similarity:222/594 - (37%) Gaps:184/594 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PELLDL-PLEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLE-----SGEEDDL---------- 135
            |.|.|: |.|.:|.    :::...||||.         .:|.:     |..:|||          
pombe     7 PRLYDMSPTESKKQ----EDVSETELVYP---------VELADATIQPSKSDDDLFDSNDFSKTY 58

  Fly   136 ---TTMEPNA---------SWPLIKCPQGWEYNTSVVW----SSIVIDFDLVCDQDIYPTIGLA- 183
               :.:..||         .|.|. ...|:.:.:..:|    |.|::..|.| |....|..|.| 
pombe    59 LAKSRILSNAMNEIGFGRYQWYLF-FVAGFGWMSDNIWPVCTSLILMRLDEV-DGPHPPAEGRAP 121

  Fly   184 ----ALNTGGPVGVYLFGLLNDRGGRRLSY-----FVCLATLLAGSLMTSLSKDF---------W 230
                :.|.|..||..::.|..|..|||.::     |..:..::||:     |.:|         |
pombe   122 YLTLSQNLGLLVGAMVWSLSADTIGRRWAFNLTFLFTGVFAVIAGA-----SPNFASICVFDALW 181

  Fly   231 TWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTY--------- 286
            ::.     ||..:|    :...|.||.:..:::..:|||: .::..|.::.:.|::         
pombe   182 SFG-----VGGNLP----VDSAIFLEALPSSHQWLLTVMS-FWWAIGQVIANLVSWGLISNFSCP 236

  Fly   287 ---------LERDW----VRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKV 338
                     ..:.|    ..:..:|.|.|.|.||..  :.|||::.|.:|...:|::.:.::|::
pombe   237 DDESVCHRADNKGWRYFLFTMGGMTLLMFAARFLVS--VYESPKFYLAKGDDYKAVETIHKIARI 299

  Fly   339 NGR------EFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADL---------------C-RTPNM 381
            ||:      |...|:..:.:.:...|..|....|....|..:|               | .:..:
pombe   300 NGKTCTLTVEELYAIDRQEQEESDLDDSKSSDAKSVTQGTTNLIVEKLRKYNFEHIRQCFGSRKL 364

  Fly   382 RLKTILITLSWFANETVYLGLS---------YY--------GPALGTNQYVSFFLSAVVELPSYL 429
            .:.:||:.|||     ..:||:         ||        .|......|.:..:.:.:.:|..|
pombe   365 AISSILVILSW-----AVIGLAFPLYNAFLPYYLETRGNANEPLSVAKTYRNSLIVSAIGVPGSL 424

  Fly   430 CCWYFMD-TWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASFL-------- 485
            .....:: ..||:..|.||:||.||                 .|:..:.|..|.::|        
pombe   425 IAGVLVEFRIGRKGTLCLSLILTGV-----------------FLFASTTAKTSNAYLGWNCTFSF 472

  Fly   486 -------IIYPFAGELYPTQVRGIGIG-ASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSML 542
                   ::|.:..|::|::|||..:| |:|....||:.. |.|..........|:.:.|.|.:.
pombe   473 FSDIMYGVLYAYTPEVFPSKVRGTAVGLAASANRILGIFS-PVIAMRANLTTSAPIFVSGALFIF 536

  Fly   543 GGMTGLRLP 551
            .|:..:..|
pombe   537 AGILVVFFP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 103/499 (21%)
xylE <306..>342 CDD:182225 11/41 (27%)
SPOM_SPAPB1E7.08CNP_594134.1 MFS_SV2_like 82..542 CDD:340874 103/501 (21%)

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