DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and SPAC23D3.12

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_594549.1 Gene:SPAC23D3.12 / 2541484 PomBaseID:SPAC23D3.12 Length:559 Species:Schizosaccharomyces pombe


Alignment Length:490 Identity:107/490 - (21%)
Similarity:169/490 - (34%) Gaps:162/490 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 YPT--IGL--AALNTGGPVGVYLFGLLNDRGGRRLSY-----FVCLATLLA----GSLMTSLSKD 228
            ||:  .||  ||.|.|...|..|||.:.|..||:..|     .|.:||:|.    .|:.|.|.|.
pombe    85 YPSGIHGLVNAAANIGNVFGQILFGFMGDFFGRKFVYGKEMIVVIIATVLVIALPKSIPTPLGKM 149

  Fly   229 FWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFV----TVMTCTFYTSGIMLLSGVTYLER 289
            .|.:|. |.::||.|...|.:...|:.|      ||.:    |:::..|...|...|:|      
pombe   150 MWIFAW-RWLLGLGIGGDYPMSATITSE------RSLLSRRGTLLSIVFSFQGFGTLAG------ 201

  Fly   290 DWVRLSYITSLPFYAYFLYMFVMPESPR---------WLLMRG-RLEEALKIL-ERMAKVNGREF 343
                 :.:|.:     .|..|..|.:.|         |.|..| .|..||.:| .|:.....:.:
pombe   202 -----AIVTII-----LLACFEKPLNQRGEYTKLEGVWRLQMGLALVPALLVLIPRLTMKESKSY 256

  Fly   344 PEA----------VHLKLEAQIRRDKLKKQKKKMANV--------------GLADLCRTPNM--- 381
            .::          .::..:.:.::|.....::|..|:              |.......|..   
pombe   257 EQSKALNKYTDNDTYIADDDEPKKDNQNVVEEKQINLTTSSDSHPTSTEDFGDKRASTVPTSENT 321

  Fly   382 -----------RLKTILIT-LSWFANETVYLG--------LSYYGPALGTNQYVSFFLSAVVEL- 425
                       ..|.:|.| :|||..:..:.|        |...|.:.|.|:|.:....|:..| 
pombe   322 SGFIEYFSQWHHFKHLLATAVSWFLLDIAFYGVNLNQSVILKAIGFSSGKNEYHTLMRGAIGNLI 386

  Fly   426 -------PSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSAS 483
                   |.|....:.::..||:|.....:.:.|:...|.....|          .:|.....|.
pombe   387 IAIAGYVPGYWFTVFLVEKLGRKWIQLQGLFITGLMFAILAGSWD----------TISTGGRFAC 441

  Fly   484 FLI--------------IYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLV 534
            |:|              :||  .|::|.:|||...|.|:.:|..|.|              |..:
pombe   442 FVIAQFFSNFGPNATTFLYP--AEVFPARVRGTAHGLSAALGKCGAI--------------LASL 490

  Fly   535 IMGFLSML-----------GGMTG-----LRLPET 553
            :..||:.:           |.|.|     |.||||
pombe   491 LFNFLTSVIGYGNVMWIFCGCMWGAIFFTLLLPET 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 107/490 (22%)
MFS 182..551 CDD:119392 100/479 (21%)
SPAC23D3.12NP_594549.1 2A0109 27..536 CDD:129965 107/490 (22%)
MFS 48..523 CDD:119392 103/486 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
TreeFam 00.000 Not matched by this tool.
11.000

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