DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and fnx2

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_596093.1 Gene:fnx2 / 2541016 PomBaseID:SPBC3E7.06C Length:577 Species:Schizosaccharomyces pombe


Alignment Length:578 Identity:108/578 - (18%)
Similarity:178/578 - (30%) Gaps:209/578 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 DDLTTMEPNASWPLIK--------------CPQGWEYNTSVVWSS-------IVIDFDLVCDQDI 176
            |.|:::..|:|:..||              .|:..|.:.|||.:|       .......|....:
pombe    27 DSLSSLNGNSSYDSIKDSSKNNKDVAEVNEYPRRPESSVSVVSNSPHRQDAATTNTVSTVSVSKV 91

  Fly   177 YPT----IGLAAL-NT---------GGPVGVY-------------------LFGLLNDRGGRRLS 208
            .|.    :.|||| ||         |...|.:                   |||...|..||:.:
pombe    92 LPALLLGVVLAALDNTIVASTYTKIGAEFGKFSQVSWTATAYMISCTAFQPLFGKFCDIYGRKKT 156

  Fly   209 YFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTF 273
            ..........|..:...|:..|....:|.|.|:....:.....|:..::|....|.....:...|
pombe   157 LLAAYCVFGIGCFLCGTSRSLWQLVAARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVF 221

  Fly   274 YTSGIML---LSGVTYLERDWVRLSYITSLPFYAY-FLYMFVMPESPRWLLMRGRLEEALKILER 334
            :..|..|   :.|....:..| |:.::..:|..|. ||.::..                      
pombe   222 FAIGSSLGGPVGGYFADQYTW-RIGFLIQVPLIAIAFLCVYFT---------------------- 263

  Fly   335 MAKVNGREFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITL-----SWFA 394
                  ...|...|:....:.|:..||         ||  :.....:...|...||     .|  
pombe   264 ------LNLPHHNHVSFMTRFRKIDLK---------GL--ILLIIGVTTMTCAFTLGGNVREW-- 309

  Fly   395 NETVYLGLSYYGPALGTNQYVSF-FLSAVVE---------------LPSYLCCWYFMDT---WGR 440
            |:.|.:.|.    ...:..|:|| ::.|.|.               |.||||.::....   |..
pombe   310 NDPVVISLL----IASSISYLSFVYVEAFVAFEPLAPMDVLTERTCLSSYLCNFFHSVANFGWIY 370

  Fly   441 RWPL------------------------SLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLS 481
            ..||                        ||..:|||.    .:.|..:....|:..|....  ::
pombe   371 GMPLFFQSIKNEGAEKSGIRLIPMIIGSSLGSLLGGA----VISLTGNYKKITVGSYFFGS--VA 429

  Fly   482 ASFLI------------IYPFAGELYPTQVRGIGIGASSYIGGLGLIGIP--------FITYLGK 526
            |.|::            :|||:|.|      |.||..::.:..: :...|        ..:||.:
pombe   430 ALFMLRYGYSNFNWEYAVYPFSGGL------GNGIAVTTTLVAI-IHASPSAFQASAIATSYLFR 487

  Fly   527 DNLKLPLVIMGF---LSMLGGMTGLRL--------PETLH---------HRLPQTIEE 564
            .|    ..::|.   .|::..:.|::|        .|.||         ||||:.|.:
pombe   488 SN----GCVLGVSISSSIVQTVLGIKLRKSLDFDVDELLHHLRKDISYVHRLPEEIRQ 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 93/521 (18%)
xylE <306..>342 CDD:182225 2/35 (6%)
fnx2NP_596093.1 MFS_Azr1_MDR_like 105..497 CDD:341045 79/454 (17%)

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