DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and SPBC1271.09

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_595141.1 Gene:SPBC1271.09 / 2539731 PomBaseID:SPBC1271.09 Length:543 Species:Schizosaccharomyces pombe


Alignment Length:528 Identity:103/528 - (19%)
Similarity:171/528 - (32%) Gaps:169/528 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 WEYNTSVVWSSIVIDFDLVCDQDI----------YP----------TIGLAALNTGGPVGVYLFG 197
            |::..:|..:.:.:..|..|...|          ||          .||:.|. .|..||...||
pombe    73 WKHFLNVAVAGVALMSDGYCSNSIGTVITILRKLYPEETTHNKSLQDIGMIAY-VGTIVGQLSFG 136

  Fly   198 LLNDRGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAGS-----------RVIVGLTIPAVYQIPF 251
            ..:||.||:.........|:   :.|:|....:.:.||           |..:|:.|.|.|....
pombe   137 WYSDRFGRKNGMITATIILI---VSTALCTGAYGYKGSINGMLSALIAYRFFLGIGIGAEYPCGS 198

  Fly   252 IISLELVGE-----NYRSFVTVMTCTFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFV 311
            :.:.|...|     .:.:|:.|      |.|.:          |                 :.||
pombe   199 VAASESSNELKSGLRHAAFIVV------TDGAI----------D-----------------FGFV 230

  Fly   312 MPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEAQIRRDK-LKKQKKKMANVGLADL 375
            :.....::|:....|..|:|:.|::...|...| .|.|.....::..| ..|.|..:..:....:
pombe   231 VGALVPYILVCIFGEHHLRIVWRLSIGLGLVIP-CVLLPFRIAMKDPKTYVKHKVPLTKIPWLLV 294

  Fly   376 CRTPNMRLKTILITLSWFANETVYLGLSYYG--------PA-------LGTNQYVSFFLSAVVEL 425
            .:....||  .::.|.||..:........|.        ||       .|.|..::.|.     |
pombe   295 LKMYGFRL--FILCLIWFVYDLSAFAFGLYSSTIVDGVLPADASTARSFGWNVLINTFY-----L 352

  Fly   426 PSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLS--------- 481
            |..|....|.|            :||...|:||          .|||..:....:|         
pombe   353 PGALLGGVFSD------------LLGPKYCLIT----------GLVLQSIFGFFMSGFYNQLVHK 395

  Fly   482 -ASFLIIYP----------------FAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNL 529
             |.|.:||.                .|.:..||.:||:..|.::.||..|  .|..:...|.|.:
pombe   396 IAGFCVIYGIFLTLGEFGPGGNIGLLASKTSPTAIRGVYYGIAAAIGKCG--AIAGVYAFGGDQV 458

  Fly   530 KLPLVIMGFLSMLGGMTGLR-LPETLHHRLPQTIEEGEE-----------FGKNWQFKDCCRCAQ 582
            :........:::...:..|. :|     :|.||..|.|:           :|..:.::     ..
pombe   459 RNYFYAASAMAIFVAVLALLFVP-----KLKQTCIEDEDKRFIQACIDAGYGNPYNYE-----KN 513

  Fly   583 KPEILSQP 590
            :||.|.:|
pombe   514 EPEQLEEP 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 94/486 (19%)
MFS 182..551 CDD:119392 83/427 (19%)
SPBC1271.09NP_595141.1 Sugar_tr 79..484 CDD:278511 92/478 (19%)
MFS 79..484 CDD:119392 92/478 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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