DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and SPCC2H8.02

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_587972.1 Gene:SPCC2H8.02 / 2538980 PomBaseID:SPCC2H8.02 Length:583 Species:Schizosaccharomyces pombe


Alignment Length:503 Identity:107/503 - (21%)
Similarity:174/503 - (34%) Gaps:157/503 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 QDIYPTIGL-----AALNTGGPVGVYLFGLLNDRGGRRLSY-----FVCLATL----LAGSLMTS 224
            || ||: |:     ||.|.|..:|..|||.|.|..||:..|     .|.:||:    |...:.|.
pombe    78 QD-YPS-GIRGVVNAATNIGNIMGQLLFGFLGDFFGRKFVYGKEMMVVIIATILIICLPDRIPTP 140

  Fly   225 LSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSG------ 283
            .:|..|.:| .||::|:.|...|.:...|:.|....|.|.  .::...|...|...|:|      
pombe   141 TAKMMWLFA-FRVMLGIGIGGDYPMSASITSEQSLINRRG--ALLAWIFSNQGWGTLAGCVATLI 202

  Fly   284 --------------VTYLERDWVRLSY-ITSLPFYAYFLYMFVMPESPRWLLMR-------GRLE 326
                          .|.|...| |:.: |...|.....:....|.||.::...:       |.|:
pombe   203 ILACFEKPLNDRGEYTKLNGVW-RIQFGIALFPAVIVLIPRLRMQESEQFKNSKNMKSPGEGDLD 266

  Fly   327 EALKI------------------LERMAKVNGREFPEAVHLKLEAQIRRDKLKKQ---------- 363
            .|.:|                  ....|.::.::.|.:||::...::.......:          
pombe   267 SASQIELHDFKKKESLTAEFTTSSPSTASLSDKKNPGSVHIRPNNEVAPSSAPSRAPSTTSVESN 331

  Fly   364 ---KKKMANVGLADLCRTPNMRLKTILI--TLSWFANETVYLGLSYYGPAL-------------G 410
               |:.....|.:.:......|...:||  .||||     .|.:::||..|             |
pombe   332 TEGKESDIQTGSSFVSYFKEWRHAKLLIGSALSWF-----LLDIAFYGINLNQSVILQEMGFNKG 391

  Fly   411 TNQYVSFFLSAVVEL--------PSYLCCWYFMDTWGRRW----PLSLSMILGGV---------- 453
            .|:|.....:|:..|        |.|......::..||:|    ...:..:|.||          
pombe   392 VNEYHILQKNAIGNLIIAVAGYIPGYWVSVVLIEVMGRKWIQIQGFLICCLLFGVLAGTWETIST 456

  Fly   454 ----ACVITVMLPDDAVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLG 514
                |||            .|..:..:....:..|:|    ..|::|::||....|..:..|..|
pombe   457 GGRFACV------------ALAQFFFNFGPNTTCFVI----PAEVFPSRVRAFSHGICAACGKAG 505

  Fly   515 LIGIPFITYLGKDNLKLPLVIMGFLSML---------GGMTGLRLPET 553
            .|    ::.|..:.|   ..::||.::|         |.:..|.||||
pombe   506 AI----LSALLFNKL---TEVIGFGNVLWIFFGCMVAGAVVTLILPET 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 107/503 (21%)
MFS 182..551 CDD:119392 98/491 (20%)
SPCC2H8.02NP_587972.1 2A0109 38..557 CDD:129965 107/503 (21%)
MFS 42..544 CDD:119392 103/499 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
TreeFam 00.000 Not matched by this tool.
11.000

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