DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and Slc22a15

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001034460.2 Gene:Slc22a15 / 242126 MGIID:3607704 Length:544 Species:Mus musculus


Alignment Length:638 Identity:168/638 - (26%)
Similarity:268/638 - (42%) Gaps:133/638 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VDEAFDLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMAD----------TPDDYWC 84
            |:|||.      .:||.|.||..|.|.:.:          ..||::|.          ||..:| 
Mouse     3 VEEAFQ------AVGEMGLYQMYLCFLLAV----------LLQLYVATEAILIALIGATPAYHW- 50

  Fly    85 RIPELLDLPLEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKC 149
               ::.||         :|.:..:::.: .|...:| :|. |..:|.|........|:       
Mouse    51 ---DMADL---------LPNQSHSNQTL-GKGQAFG-DWL-LTANGSEIHKHVHFSNS------- 93

  Fly   150 PQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLA 214
                       ::||..::.|:.::....:...::..:|..|||..||.|:||.|||..|....|
Mouse    94 -----------FTSIASEWFLIANRSYKVSAASSSFFSGVFVGVISFGQLSDRFGRRKVYLTGFA 147

  Fly   215 TLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIM 279
            ..:..::....|..:..:|.:|.:||:....:..:.|::..|.||..|.:....:...|:..||.
Mouse   148 LDILFAVANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIA 212

  Fly   280 LLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFP 344
            ..:.:.|..|.|..|:.:.:|.....||....:|||||||..:|||.||.:.|..:||       
Mouse   213 QYALLGYFIRSWRTLAVLVNLQGTLVFLLSLFIPESPRWLYSQGRLSEAEEALYFIAK------- 270

  Fly   345 EAVHLKLEAQIRRDKLK--------KQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLG 401
                       |..|||        ..:...|.....||.|...:...|:::...||....||.|
Mouse   271 -----------RNRKLKCTFSLTHPANRSYRATGSFLDLFRYRILLGHTLILMFIWFVCSLVYYG 324

  Fly   402 LSYYGPALGTNQYVSFFLSAVVELPSY-LCCWYFMDTW-GRRWPLSLSMILGGVACVITVMLPDD 464
            |:.....||.:.|.:..||.::|:||| ||.:.....| ||:..|:..:.|||:||:|.:.||:.
Mouse   325 LTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLINQRWFGRKRTLAAFLCLGGLACLIVMFLPEK 389

  Fly   465 ------AVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITY 523
                  ||..:..|.|:.|..:||:|.|:|.:..|||||.:|.:|:||.|....:|.|..||:..
Mouse   390 KDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGACSMFSRVGGIIAPFVPS 454

  Fly   524 LGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEE---------GEEFGKNWQFKDCCR 579
            |.:....||.::.|...:..|:..|.|||||:..|.:|..:         |||            
Mouse   455 LKEVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLETFSDLQMYSYRRLGEE------------ 507

  Fly   580 CAQKPEILSQPASYENLDVLAGSSTNASEVELELRDSRRVREPAPRIDERTPL 632
             |...:.|..|...:.:       ::.||.|.|..|:          ||.|.:
Mouse   508 -ALSLQTLDPPQPLDKV-------SSESEEEEEFYDA----------DEETQM 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 149/542 (27%)
MFS 182..551 CDD:119392 117/384 (30%)
Slc22a15NP_001034460.2 MFS 121..469 CDD:119392 114/365 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 513..544 10/47 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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