DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and Y66D12A.13

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_499489.1 Gene:Y66D12A.13 / 190497 WormBaseID:WBGene00013439 Length:533 Species:Caenorhabditis elegans


Alignment Length:640 Identity:129/640 - (20%)
Similarity:231/640 - (36%) Gaps:208/640 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VDEAFDLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPL 94
            ||:.|:||.....:..|.::   |:|.:       .....|| :|.|..|     |:|..     
 Worm     6 VDDIFELDAYQLVVLAFNEF---LIFTM-------LSNVVFN-MFGAAAP-----RLPGC----- 49

  Fly    95 EQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQ-------- 151
                          |:::|                           ||:.|..:|.|        
 Worm    50 --------------DDIIY---------------------------NATSPFQQCEQYDAHLDCE 73

  Fly   152 --GWEYNTSVVWSSIVIDFDLVCDQ--------DIYPTIG----LAALNTGGPVGVYL----FGL 198
              ..||.    :.|:.::|..:|.:        .|....|    :....|...:|:.|    .|.
 Worm    74 EPAMEYE----FKSVAVEFQELCSRHNEHSYMDSITQLFGVNNRVRFSTTSQMIGIMLGSAIAGQ 134

  Fly   199 LNDRGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYR 263
            |:|..||:....:.|..:|..|..:|.|.....:...|..:|:....:..:..|:.:|.:...:|
 Worm   135 LSDLYGRKKITLLFLCMMLFFSTSSSFSSSIEVFIIVRFFIGICCGGLTTVGSILVVENLPSAHR 199

  Fly   264 SFV-TVMTCTFYTSGIMLLSGVTYLERDWVRLSYI-TSLPFYAYFLYMFVMPESPRWLLM--RGR 324
            .:: ||:|   :....||.:...|:..:|..|:.: .::...|..:..|::||||::|:.  :|:
 Worm   200 LWMSTVVT---WAPNYMLFALFAYITGEWRCLARMCNAMTVIAILICAFLLPESPKYLIQARKGK 261

  Fly   325 LE-EALKILERMAKVNGR----EFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLK 384
            |. :::|.:.:..:|..:    |..:.||..:|..      .|.:.|........|...|.:.::
 Worm   262 LAVKSIKYINKFKRVRNQLTDTEIEDVVHSAIEVD------TKSRAKAKKYSFIHLYIHPKITVQ 320

  Fly   385 TILITLSWFANETVYLGLSY-YGPALGT---NQYVSFFL----SAVVELPSY------------- 428
            |::.::|.|:...|..||.: |....|:   |..||.||    .|||.:..:             
 Worm   321 TVVASISMFSVSYVTYGLLFNYDVLTGSIYMNAAVSGFLRYVVGAVVAVLDHFGGEHVGRKRMHF 385

  Fly   429 ------LCCW------YFMD------TWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLV 475
                  :||.      ||.|      :|.|...|   :..|...|:                   
 Worm   386 ITVSFIMCCMFGIFFIYFNDLVLEYKSWIRALTL---LAFGTTGCL------------------- 428

  Fly   476 SKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPF--------ITYLGKDNLKLP 532
                    ||.:.....|::||.:|.|   ||::|...|.:|..|        :.:.|...|   
 Worm   429 --------FLQLLLITAEMFPTGIRNI---ASAHINVCGRLGNVFGPMVFSYKLGFAGSGYL--- 479

  Fly   533 LVIMGFLSMLGGMT-GLRLPETLHHRLPQTIEEGEEFGKNWQFKDCCRCAQKPEI 586
              |:|.:.:|..:. .:.:|||.:..|||.:...::     |.||       ||:
 Worm   480 --ILGVICLLDVIVFHIFIPETKNQPLPQGMPSRKK-----QRKD-------PEV 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 118/599 (20%)
MFS 182..551 CDD:119392 89/429 (21%)
Y66D12A.13NP_499489.1 2A0119 36..506 CDD:273328 114/572 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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