DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and Y57G11C.23

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_502801.2 Gene:Y57G11C.23 / 190377 WormBaseID:WBGene00013318 Length:529 Species:Caenorhabditis elegans


Alignment Length:520 Identity:117/520 - (22%)
Similarity:198/520 - (38%) Gaps:121/520 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 DFDLVCDQDIYPTIG-------LAALNT---------------------------GGPVGVYLFG 197
            |||...|.|:.|...       :||..|                           |..||..:.|
 Worm    58 DFDRHSDSDVCPFASTNFDQCVVAANKTDFYSAQYEYQQDCTGLKYFSSSTSTFLGTLVGNLILG 122

  Fly   198 LLNDRGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENY 262
            .|:|..|||..|...:...:...::::...|..::...|.:||..|.....:.:..:.|:|..:.
 Worm   123 YLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGFAIAGTLTVGWTYASEMVIPSR 187

  Fly   263 RSFVTVMTCTFYTSGIMLLSGVTYLERDWVRLSYI------TSLPFYAYFLYMFVMPESPRWLLM 321
            |  ..:.|...:.:..|:..||::|..:|...||:      |.||...|      :||||.:|..
 Worm   188 R--FRLRTFPNWANARMMQVGVSWLAGEWRLASYLCAALSATVLPMIWY------LPESPVFLEQ 244

  Fly   322 RGRLEEALKILERMAKVNGREF-PEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKT 385
            :.:.:.|.:..|::|.:...|: |:|          |::::..||    :....|.::|.:|...
 Worm   245 KKKYKRAERSREKIAGICQLEYEPKA----------REEMQDLKK----ITPIKLLKSPVLRTNF 295

  Fly   386 ILITLSWFANETVYLGLSYYGPALGT-----NQYVSFFLSAVVELPSYLCC--------WYFMDT 437
            :::...||     |:|:|.|...|.:     |.||..||..:|...|.:..        |.    
 Worm   296 LVLCWMWF-----YVGMSVYITDLNSGDMAENFYVGQFLCGLVLTVSKIMIGILEPKIPWL---- 351

  Fly   438 WGRRWPLSLSMILGGVA--CVITVMLPDDAVD-ETLVLYLVSKALLSASFLIIYPFAGELYPTQV 499
             |||.....|.|:..:|  .::|.:...:.|. ...|.|:::.|..|......|....||.||.|
 Worm   352 -GRRCLFISSQIIAILAYITILTALWTRNKVSWWYTVAYILAYAGQSLCLETCYLSLAELMPTDV 415

  Fly   500 RGIGIGASSYIGGLGLIGIPFITYLGKDNLKL-----PLV-IMGFLSMLGGM--TGLRLPETLHH 556
            |.|.       |.|..|.:...|.|......:     ||: |:..:...||:  ....|||:.:.
 Worm   416 RTIS-------GALMNILMKIGTILASTTKPIKFWYEPLLFIINTIICTGGLIIVWKYLPESKNM 473

  Fly   557 RL----PQTIEEGEEFGKNWQFKDCCRCAQKPEILSQPASYENLDVLAGSSTNASEVELELRDSR 617
            .:    ...|:|.|:        |.....:||..:...|:..     ..:||.|:|:|.|:...:
 Worm   474 NMQLVGQDDIDEDED--------DDSNKTEKPSEIPSEATKS-----VKTSTEATEMESEVETEK 525

  Fly   618  617
             Worm   526  525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 104/462 (23%)
MFS 182..551 CDD:119392 95/426 (22%)
Y57G11C.23NP_502801.2 2A0119 <107..473 CDD:273328 95/404 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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