DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and C44C10.3

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_509958.2 Gene:C44C10.3 / 183452 WormBaseID:WBGene00008084 Length:474 Species:Caenorhabditis elegans


Alignment Length:506 Identity:112/506 - (22%)
Similarity:203/506 - (40%) Gaps:111/506 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 SLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQGWEYNTSVVWSS 163
            |:.:||....|..|...|..|        :|..:|:||.::|                   :::|
 Worm    32 SIHVPKWKCGDGPVTKDCKVY--------QSCPKDNLTFVDP-------------------IFTS 69

  Fly   164 IVIDFDLVCDQDI-YPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSLSK 227
            :.:|||.||.... |.:........|..||..|||.|:|:.||:....:.:...:...|.|.||.
 Worm    70 VAMDFDWVCGSSAHYQSFFSLVQYLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSP 134

  Fly   228 DFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSG--IMLLSGVTYLERD 290
            :......:|...||:|..|    .:.....:.|:..|...::...|:..|  .:.::.|.||.::
 Worm   135 NRQLLFIARFCSGLSIAGV----LVCICAWILESILSHQRMVIRAFFNWGWTRVFITVVCYLTQE 195

  Fly   291 WVRLSYITS---LPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLE 352
            |...||:.:   :|  |..:.:|::|||..||..:|...:.::..:.|||:.|..:....|    
 Worm   196 WRLASYVCAACLVP--ALLMLIFLIPESAIWLHSKGETAKMIESEKFMAKIAGVSYVPIEH---- 254

  Fly   353 AQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSW-------FANE--------TVYLGL 402
                  ||...|.      |.:...|..:..|..::.:.|       |||:        .:||..
 Worm   255 ------KLIHSKT------LLETLNTKGLFKKLFVLWIMWFFVAVCGFANDLNSNSLAGNLYLNQ 307

  Fly   403 SYYGPALGTNQYVSFFLSAVVELPSYLCCWYFMDT----WGRRWPLSL------SMILGGVACVI 457
            :.:|        :...||.:|.|        |:||    :.||   :|      .||:..:...|
 Worm   308 ALFG--------ILLVLSKIVLL--------FVDTKFENFKRR---TLHQGSQSGMIISFLILAI 353

  Fly   458 TVMLPDDAVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFIT 522
            .:.: |......|::||.....:..::..:|..|.|...|..|...:|:.|.:..:|.:..||:|
 Worm   354 FLWI-DYHGTGFLIVYLFGTMFIEYTWDAVYLCAIESMETSSRASAVGSCSLMARIGSLLAPFLT 417

  Fly   523 YLGKDNLKLP------LVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEE 567
            |.   |...|      ::::|.::::  ::.:.|.||.:..|.:.....:|
 Worm   418 YA---NTWWPPAVYFTIIVLGTVNLI--ISFMFLQETKNVNLDEVQVNDDE 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 111/498 (22%)
MFS 182..551 CDD:119392 88/404 (22%)
C44C10.3NP_509958.2 2A0119 <64..456 CDD:273328 100/457 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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