DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and C06H5.6

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_507509.3 Gene:C06H5.6 / 180170 WormBaseID:WBGene00007394 Length:556 Species:Caenorhabditis elegans


Alignment Length:631 Identity:145/631 - (22%)
Similarity:254/631 - (40%) Gaps:139/631 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 HKPESQPSVDEAF-----DLDDLLPTIGEFGKYQKL---------LVFGICLPACIPCGFCAFNQ 72
            |.|.|. |:...|     |.|.:|...|::|:||.|         ::|.:.: ..:|  |...:.
 Worm     9 HPPRSN-SMSATFNYLHLDADKVLTAFGKYGRYQMLAYVITTSVHMLFALNM-MIMP--FITKSV 69

  Fly    73 LFMADTPDDYWCRIPELLDLPLEQRKSLSIPKELDN---DELVYSKCYTYGVNWTQLLESGEEDD 134
            .|:.|.||                      |:.:|:   ..||...|:   :..|||       :
 Worm    70 EFLCDLPD----------------------PESIDSAHFSPLVGDSCH---LQDTQL-------N 102

  Fly   135 LTTMEPNASWPLIKC--PQGWEYN-TSVVWSSIVIDFDLVCDQDIYPTIGLAALNT-----GGPV 191
            :|          |.|  ..|..|| .:...|:|..||||||:..     |:|...|     ||.:
 Worm   103 IT----------IDCLAVNGASYNYLADKKSTITSDFDLVCEYQ-----GMAEHATSIFLVGGMI 152

  Fly   192 GVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLE 256
            .......|:|..|||..:.:.|...:|.:|:.:.:.::..:...|.|.|:...:.....|::.:|
 Worm   153 VSPFVSQLSDILGRRPLFLIPLYISVAANLICAAAPNYLIFLLFRFISGVATTSFSMTGFVLCME 217

  Fly   257 LVGENYRSFVTVMTCTFYTSGIMLLSGVTYL-ERDWVRLSYITSLPFYAYFLYMFVMPESPRWLL 320
            .|...:||.:.|:|...:..|.| |:||.|: .::|..|.:..|:|......:.:..|||..|| 
 Worm   218 SVSLEFRSLIPVLTTISWVGGYM-LAGVFYVFFKNWRVLYFAASVPGLLTIPFFWFTPESLHWL- 280

  Fly   321 MRGRLEEALKILERMAKVNGREFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRT------- 378
                          |.|.|.|:..:.::..:       ...||     .:.|.| ||.       
 Worm   281 --------------MTKQNDRKIKKYINESV-------AFNKQ-----TISLID-CRNIQTVDNA 318

  Fly   379 --------------PNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYVSFFLSAVVELPSYL 429
                          |.:.:..::.:.........|..||.|...|..::...:|||.:||||:..
 Worm   319 PATTKTRTFRALFYPKIFVHVVINSFILIVMSGTYWALSLYSTELSEDETTGYFLSGLVELPAGF 383

  Fly   430 CCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSK---ALLSASFLIIYPFA 491
            ...:.:..:.|:.....|:....|..:.||.:|... :..::..|::|   :::.||..::|   
 Worm   384 LSVFLLIAFKRKTVSFYSLAFTAVFMLCTVYIPMQG-NYKMIFPLLAKSTNSIVWASQPLLY--- 444

  Fly   492 GELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHH 556
            .|..||.:|.:..|..|::|.||.||.|::..|...|...|.:::..:|::.....|..|||.:.
 Worm   445 SEATPTTIRNVFSGVVSFVGELGSIGAPYMNRLTAINQDAPAILISIMSIVAAFLVLLQPETKNK 509

  Fly   557 RLPQTIEE---GEEFGKNW-QFKDCCRCAQKPEILSQPASYENLDV 598
            :||:.:::   |..| :.| :.||........|:..:..:.|.|:|
 Worm   510 KLPEDLDQFDAGPLF-RGWKKQKDLEASEASEEVKEKEEAVELLEV 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 100/429 (23%)
xylE <306..>342 CDD:182225 8/35 (23%)
C06H5.6NP_507509.3 MFS_SLC22 115..504 CDD:340875 99/426 (23%)

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