DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and F17C11.12

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_505789.1 Gene:F17C11.12 / 179514 WormBaseID:WBGene00008923 Length:540 Species:Caenorhabditis elegans


Alignment Length:462 Identity:101/462 - (21%)
Similarity:188/462 - (40%) Gaps:63/462 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 CPQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCL 213
            |.:..|......:..|...|.|:|:......:|.:....|..:|..:||.:.|:.||:.....||
 Worm    94 CKEQKEMTFERQFYGITEQFKLLCEDAKLEKLGTSIQMLGVMLGCVVFGQIGDQYGRKTPMMFCL 158

  Fly   214 ATLLAGSLMTSLSKDFWTWAGSRVIVGL------TIPAVYQIPFIISLELVGENYRSFVTVMTCT 272
            .......:|::||.||..:...|.|:..      ||..||.|      |.:.:..|.:::  |..
 Worm   159 CMCFIFGIMSALSADFKKFTIFRTILCFFNGGQSTISVVYMI------ENIPKRTRGYIS--TLI 215

  Fly   273 FYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAK 337
            .|:..::||..:.:..:.|.||:.:.|.......:.:..:.||||||:.:|::..|.|:...:.|
 Worm   216 SYSPNVILLGILAFFFQQWDRLALVISFLTVPAIIMLAFLHESPRWLMQKGQISHAKKVFLAIEK 280

  Fly   338 VNGREFPEAVHLKLEAQIRRDKLKKQKKKMAN----VG----LADLCRTPNMRLKTILITLSWFA 394
            .:|  .|.|..|. |.::......:..|::|:    ||    ...|.:|..:...|.:|..::||
 Worm   281 FDG--VPAAKSLN-ETELENFLENEHDKQVADGNTEVGKQHSFWHLFKTKEIMTGTFVIAFTFFA 342

  Fly   395 NETVYLGLSYYGPALGTNQYVSFFLSAVVELPSYLCCW---YFMDTWGRRWPLSLSMILGGVACV 456
            ...:...:.:...|:..:.|::..|..::.....|...   |..:.:.|:       :..|:..|
 Worm   343 TTLINYSIMFNLGAVAGSIYMNSILIGLLRYSFSLFSGLLDYKFEKFDRK-------MCHGICSV 400

  Fly   457 ITV---------MLPDDAVDETLVL---YLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSY 509
            :|:         .|.|.....::::   .|:|.|:.|.:.::....:.||.||.:|.|....:..
 Worm   401 VTISIIVAIIAFCLTDTTATFSVLIRIGVLLSCAMTSQAIIVASIASNELMPTAIRSISYSTAQL 465

  Fly   510 IGGLGLIGIPFI----TYLGKDNLKLP---LVIMGFLSMLGGMTGLRLPETLHHRL-------PQ 560
            ....|::..|.:    .|.|.|...||   |:.:|....:  .....:|||.:..|       .:
 Worm   466 CSRFGIVFAPHVFHLNLYTGIDFPVLPYAILLAIGLADFI--FFRFLIPETKNKPLEDFIVNRTK 528

  Fly   561 TIEEGEE 567
            ||...||
 Worm   529 TIGNDEE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 97/454 (21%)
MFS 182..551 CDD:119392 86/404 (21%)
F17C11.12NP_505789.1 2A0119 <109..521 CDD:273328 95/431 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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