DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and C46C2.2

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_501604.2 Gene:C46C2.2 / 177744 WormBaseID:WBGene00008110 Length:520 Species:Caenorhabditis elegans


Alignment Length:516 Identity:126/516 - (24%)
Similarity:205/516 - (39%) Gaps:98/516 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CGFCAFNQLFMADTPDDYWCRIPELLDLPLEQRK-SLSIPKELDNDELVYSKCYTYGVNWTQL-- 126
            |.|.:..|||..     :....|:...:...|.| ...:||         |||..|..|:..|  
 Worm    22 CHFFSIQQLFPI-----FLNYTPKTNCIQTAQGKVCYDVPK---------SKCLEYNENFPNLCA 72

  Fly   127 -LESGEEDDLTTMEPNASWPLIKCPQGWEYNTSVVWSSIVIDFDLVCD---QDIYPTIGLAALNT 187
             |......|..| |.:.|:                :||..::|::.|.   :|..|..   ....
 Worm    73 NLTGTALSDCHT-EKSHSY----------------YSSAAMEFEIYCRPGWKDFRPAF---VQYV 117

  Fly   188 GGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAG---SRVIVGLTIPAVYQI 249
            |..:|..:.|.:.|:.||:.::   :.::|.|....|||..|.:.|.   .|.:.|:.|.....:
 Worm   118 GVLIGNIILGYVADQIGRKKTF---ILSMLIGIPSLSLSATFNSIAAFYIFRALTGIGIAGTMIV 179

  Fly   250 PFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLERDWVRLSYITS-LPFYAYFLYMFVMP 313
            .:....|||..:.|  ..:.|.:.:.:..::|:.|.....:|...|:::: :......:..|::|
 Worm   180 GWAYFSELVSPHQR--FKLRTFSNWANARIMLTLVALFTGEWRLSSHVSAVISLITLAIVYFILP 242

  Fly   314 ESPRWLLMRGRLEEALKILERMAKVNGREF-----PEAVHLKLEAQIRRDKLKKQKKKMANVGLA 373
            ||..||..:||.|||....:|:|.:.|.||     ||..         .|.::.:|.    |.:.
 Worm   243 ESHIWLRKKGRYEEAEVSRKRIADLAGIEFVPMPPPEKA---------ADNVEPEKA----VNIC 294

  Fly   374 DLCRTPNMRLKTILITLSWF-ANETVYLGLSYYGPALGTNQYVSFFLSAVVELPSYLCCWYFMD- 436
            .:...|.:|...:::.|.|| ...|.|| ....|..:..|.:|..|||.:: |........|.| 
 Worm   295 TVFADPQLRKNILILWLMWFVTGMTAYL-TDLCGGDMTKNFWVGQFLSGIL-LSVVRIIMGFADG 357

  Fly   437 --TW-GRRWPL----SLSMILGGVACVITVMLPDD-------AVDETLVLYLVSKALLSASFLII 487
              .| |||:.|    ||:::..|  |||..:...:       ||      ||.|....|..:...
 Worm   358 YLPWMGRRFVLLCSQSLAIVFFG--CVIAFLFAGEKGQWYYTAV------YLASFVFTSIVWEPC 414

  Fly   488 YPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGL 548
            |..|.||.||.||.....:.|.:|....||...::  |...:..|.|.|..:|:  |:|.:
 Worm   415 YLCASELMPTDVRATSTASCSIVGRFANIGASMLS--GLKTVYEPGVHMISISL--GLTNV 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 126/516 (24%)
MFS 182..551 CDD:119392 99/392 (25%)
C46C2.2NP_501604.2 2A0119 58..486 CDD:273328 116/466 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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