DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and B0252.3

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001021888.1 Gene:B0252.3 / 174130 WormBaseID:WBGene00015088 Length:484 Species:Caenorhabditis elegans


Alignment Length:474 Identity:120/474 - (25%)
Similarity:209/474 - (44%) Gaps:47/474 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 YTYGVNWTQLLESGEEDDLTTMEPNASWPL---IKCPQGW----------------EYNTSVVWS 162
            |||..:.:...:...:|.|.|::.:....|   :.|...|                ..|:|.:  
 Worm    15 YTYQQDMSSSDKLSADDVLNTLDKSNRHILTCILVCGLAWSPLAFTGLCPSFVVKASENSSFI-- 77

  Fly   163 SIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLA-GSLMTSLS 226
            .:..:|||..|..............|..:|......|.|..| ||..||....|:| |.::::.|
 Worm    78 GVADEFDLTGDASWLAESTTTFYMVGNMIGGMFIPPLADHYG-RLPVFVATVLLMAVGGMISAFS 141

  Fly   227 KDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLERDW 291
            .....:...|:|.|:...|.....:::..|......|.|.:|.....:..|...|..:.|:..||
 Worm   142 TSIMMFCIMRMIHGIFYTAAGLAGWVLGYENTPLRLRFFTSVYFGVMWVVGACFLGLLAYILPDW 206

  Fly   292 VRLSYITSLP--FYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEAQ 354
            ..|.:..|:|  |.|..:||.| |||..:|:...:.|   ||...:.|:.|.          :..
 Worm   207 RYLMFCISVPNIFVALLIYMTV-PESLHFLVSSQQNE---KIEAWLEKIRGP----------KGD 257

  Fly   355 IRRDKLKKQKKKMANVGLADLCR---TPNMRLKTILI-TLSWFANETVYLGLSYYGPALGTNQYV 415
            |....:.:.:.:..: ....|||   ...|.:..:|: |..|..:..:|.||::|...|..|.|:
 Worm   258 ISASDIVEDRDENGS-SFKTLCREMWKHKMFIVYVLVMTYIWIVDTFIYFGLAFYSTNLAGNLYL 321

  Fly   416 SFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALL 480
            :|.|.::||.|:|:....||:.:||:..:|.:.|:.|:: .:.::|..:|..  :..:|:.|..:
 Worm   322 NFVLMSLVEAPAYIFSPIFMNKYGRKVLISGTHIIAGLS-FLGIVLSSEAWH--IHFWLLGKFAI 383

  Fly   481 SASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGM 545
            |.||:.||.||.|::||..|...||....:...|.:..|::::|...:...|.:.:..:::.||:
 Worm   384 SCSFMSIYMFASEIFPTDGRNKCIGFCETLSRFGGMLSPYLSHLTAVHALAPAITLSLIAVSGGL 448

  Fly   546 TGLRLPETLHHRLPQTIEE 564
            ..|.|||||:.:||.||.|
 Worm   449 LTLILPETLNTKLPSTIAE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 102/421 (24%)
xylE <306..>342 CDD:182225 12/35 (34%)
B0252.3NP_001021888.1 MFS_SLC22 73..454 CDD:340875 101/401 (25%)

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