DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and B0252.3

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001021888.1 Gene:B0252.3 / 174130 WormBaseID:WBGene00015088 Length:484 Species:Caenorhabditis elegans


Alignment Length:474 Identity:120/474 - (25%)
Similarity:209/474 - (44%) Gaps:47/474 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 YTYGVNWTQLLESGEEDDLTTMEPNASWPL---IKCPQGW----------------EYNTSVVWS 162
            |||..:.:...:...:|.|.|::.:....|   :.|...|                ..|:|.:  
 Worm    15 YTYQQDMSSSDKLSADDVLNTLDKSNRHILTCILVCGLAWSPLAFTGLCPSFVVKASENSSFI-- 77

  Fly   163 SIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLA-GSLMTSLS 226
            .:..:|||..|..............|..:|......|.|..| ||..||....|:| |.::::.|
 Worm    78 GVADEFDLTGDASWLAESTTTFYMVGNMIGGMFIPPLADHYG-RLPVFVATVLLMAVGGMISAFS 141

  Fly   227 KDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLERDW 291
            .....:...|:|.|:...|.....:::..|......|.|.:|.....:..|...|..:.|:..||
 Worm   142 TSIMMFCIMRMIHGIFYTAAGLAGWVLGYENTPLRLRFFTSVYFGVMWVVGACFLGLLAYILPDW 206

  Fly   292 VRLSYITSLP--FYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEAQ 354
            ..|.:..|:|  |.|..:||.| |||..:|:...:.|   ||...:.|:.|.          :..
 Worm   207 RYLMFCISVPNIFVALLIYMTV-PESLHFLVSSQQNE---KIEAWLEKIRGP----------KGD 257

  Fly   355 IRRDKLKKQKKKMANVGLADLCR---TPNMRLKTILI-TLSWFANETVYLGLSYYGPALGTNQYV 415
            |....:.:.:.:..: ....|||   ...|.:..:|: |..|..:..:|.||::|...|..|.|:
 Worm   258 ISASDIVEDRDENGS-SFKTLCREMWKHKMFIVYVLVMTYIWIVDTFIYFGLAFYSTNLAGNLYL 321

  Fly   416 SFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALL 480
            :|.|.::||.|:|:....||:.:||:..:|.:.|:.|:: .:.::|..:|..  :..:|:.|..:
 Worm   322 NFVLMSLVEAPAYIFSPIFMNKYGRKVLISGTHIIAGLS-FLGIVLSSEAWH--IHFWLLGKFAI 383

  Fly   481 SASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGM 545
            |.||:.||.||.|::||..|...||....:...|.:..|::::|...:...|.:.:..:::.||:
 Worm   384 SCSFMSIYMFASEIFPTDGRNKCIGFCETLSRFGGMLSPYLSHLTAVHALAPAITLSLIAVSGGL 448

  Fly   546 TGLRLPETLHHRLPQTIEE 564
            ..|.|||||:.:||.||.|
 Worm   449 LTLILPETLNTKLPSTIAE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 117/469 (25%)
MFS 182..551 CDD:119392 95/375 (25%)
B0252.3NP_001021888.1 MFS 87..454 CDD:119392 96/385 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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