DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and K05F1.6

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001342018.1 Gene:K05F1.6 / 173977 WormBaseID:WBGene00019408 Length:858 Species:Caenorhabditis elegans


Alignment Length:713 Identity:165/713 - (23%)
Similarity:291/713 - (40%) Gaps:142/713 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ELRQRH--------------KPESQPSVDEAFDLDDLLPTIGEFGKYQKLLVFGICLPACIPCGF 67
            |:|::|              :.|.:|:  :..|.:.:|..||.. ::.::.::.:.....||...
 Worm   171 EIREQHQKVQQIYRDVNKKERKEGKPT--DPIDFEGILNIIGGC-RWWQIWIYVLIALQQIPHAM 232

  Fly    68 CAFNQLFMADTPDDYWCRIPELLDL-------------PLEQRKSLSIPKELDNDELVYSK--CY 117
            ...|.::|...| ::.|.:|...|.             .::..|::|......|.:..|.:  ||
 Worm   233 FNLNVVYMMYDP-EFQCMVPGFNDTNDTTISSHGPYLWGVDDIKNISFVFPNANSDGAYQRDSCY 296

  Fly   118 TYGVNWTQLLESGEED-------DLTTMEPNASW----PLIKCPQGWEYNTSVVWSSIVIDFDLV 171
            .|        |..||.       .|.|....| |    |..|| |.:.:...|:..:||.||:||
 Worm   297 FY--------ERSEERYRQLRRMPLETAMSEA-WKDVAPKKKC-QAYHFEKDVMVETIVTDFNLV 351

  Fly   172 CDQ-------DIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSL---- 225
            ||.       .::.:||..       :|..|.|:.:|:.||:       .|::...:::|:    
 Worm   352 CDSWFAKGHAHMFYSIGYL-------LGCVLGGIASDKIGRK-------PTIIGFGILSSMLGVF 402

  Fly   226 --SKDFW-TWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYL 287
              ..|:: .:...|::..:...|.....:.:.:|:.|..||:.|..|....:..|..||:.:.||
 Worm   403 LPFNDYYPMFLLIRLLSAICNEAADLAAYTLCMEITGTKYRAMVGSMLQAPWALGYALLALIAYL 467

  Fly   288 ERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHL--- 349
            .:.|..:..|.:...:...:::..:|||||||:::.|:.||.:::.:..    ||.|...::   
 Worm   468 TKSWKTIQVIAAGLHFMSIIFICSIPESPRWLMVQNRVSEAEEVIRKAC----REPPFPFNMCTT 528

  Fly   350 --------KLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYY- 405
                    .||....|:: |..||....:|..||.....:|.:||.:.:.:.|...||.||... 
 Worm   529 SKCGNLPSDLELVSHRER-KLNKKNGGKIGFLDLFTMKELRYRTISVCIVFMATALVYYGLVMAL 592

  Fly   406 --GPALGTNQYVSFF-----LSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPD 463
              ..|.|...:..:|     ::..:|:|:...|.:.|.. ||:..|.|::|..|:..::.::   
 Worm   593 SDQSAPGRTLFTGYFHLNNGIAGAIEIPTLFACVWMMQL-GRKKALMLTLITSGLFIIVAML--- 653

  Fly   464 DAVDETLVLYLV----SKALLSASFLIIYPFAGELYPTQVRG-----------IGIGASSYIGGL 513
            ..|....:|.|.    .|..:..:|.|:|.|..|||||.||.           .|.|.||||..|
 Worm   654 SMVSGHYMLALAFMYFGKIAVQGAFNILYIFTSELYPTVVRNTAVGVTSMVARFGSGLSSYIALL 718

  Fly   514 GLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCC 578
            ..|.:|.:          |::|....|:..||....||||....||:|:::...|.:..:..:| 
 Worm   719 SNISLPIV----------PMIIFAVFSLFAGMLVFVLPETSEKPLPETLDDAINFLEPTKQVNC- 772

  Fly   579 RCAQKPEILSQPASYENLDVLAGSSTN--ASEVELELRDS---RRVREPAPRIDERTPLDTTA 636
             ...:..:.......:::.:....|||  |....|..|.|   ||:.|.|..|..|....|.:
 Worm   773 -MMGRFGVFGHQKMTKSISLTENPSTNDIADLKPLSRRSSAITRRMTERASVIYSRNASRTNS 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 140/590 (24%)
MFS 182..551 CDD:119392 96/409 (23%)
K05F1.6NP_001342018.1 MFS_SLC22 333..746 CDD:340875 107/445 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.