DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and Ust4r

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_599206.2 Gene:Ust4r / 171397 RGDID:620976 Length:552 Species:Rattus norvegicus


Alignment Length:551 Identity:122/551 - (22%)
Similarity:236/551 - (42%) Gaps:35/551 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DLLPTIGEFGKYQKL-LVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLP-------- 93
            :||..:|..|::|.| :||.:.....:.......|  |.|..| .:.|.:|.|.::.        
  Rat     5 ELLNQVGGLGRFQILQMVFVVFTSVIVVPHIIIEN--FTAAIP-SHRCWVPILDNVTVSDNDSRI 66

  Fly    94 LEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQGWEYNTS 158
            |.|.|.|.|...||: .|...||..:......||:..:.....| ||:..    .|..||.|:.|
  Rat    67 LNQDKLLKISIPLDS-HLRLDKCRRFAQPQWHLLDLNDTFSSIT-EPDTE----PCVDGWVYDRS 125

  Fly   159 VVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMT 223
            ...|:.|.:::|||:.....::...:...|..:|..:.|||:||.||:......|..:.......
  Rat   126 NFHSTTVTEWNLVCESQALNSVTKLSFMIGAFIGGIVNGLLSDRFGRKFILKYALLQMAITETCA 190

  Fly   224 SLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLE 288
            ..:.:.:.:...|.:.|:::..:.....::..|.....:.:.|||:.....:.|.|:|:|:.:..
  Rat   191 GFAPNLFIYCSLRFLAGMSLEPITVNINLLMFEWTSPKFLTMVTVLGSCAGSFGGMILAGLAFQF 255

  Fly   289 RDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGRE------FPEAV 347
            ::|..|....|:|.:.:.:....:.||.|||::..:.::.||.|:::|.:||.:      ..|.|
  Rat   256 QNWHHLQLAMSVPIFFFLILTRWLSESARWLIVINKPQKGLKELKKVAHINGMKKSGDNITMEVV 320

  Fly   348 HLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGTN 412
            ...::.::...|::...:        ||..||.:|.:..:::..........:|::.:...|..|
  Rat   321 RTSMKKELEAAKMRPSPR--------DLFHTPILRKQIYILSFIRLLFILSGVGVAIHLQHLSNN 377

  Fly   413 QYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSK 477
            ..:...|.:|..:...:...:.::..|||....:.|.|.|::.:..:..|.:......::.::::
  Rat   378 IELLQILISVSSILFSVIGHFVLNHIGRRITQMVIMFLRGISILTAIFAPQEMETLRFIMAMMAE 442

  Fly   478 ALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSML 542
            .|.:.|:......|.||.||.:|....|.....|.:|....|....|...:..||.:..|..::|
  Rat   443 GLAALSYAANSLHANELLPTTLRATARGVIGMFGNIGFFLAPLCMMLASYSPNLPWIFYGGFAIL 507

  Fly   543 GGMTGLRLPETLHHRLPQTIEEGEEFGKNWQ 573
            .|...|.||||.::.||....:.|   .:|:
  Rat   508 SGFIVLLLPETKNNPLPDCTHDVE---NDWK 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 83/404 (21%)
xylE <306..>342 CDD:182225 11/35 (31%)
Ust4rNP_599206.2 MFS_OAT 109..516 CDD:340932 87/419 (21%)

Return to query results.
Submit another query.