DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and LOC1273930

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_003436715.2 Gene:LOC1273930 / 1273930 VectorBaseID:AGAMI1_008511 Length:588 Species:Anopheles gambiae


Alignment Length:564 Identity:158/564 - (28%)
Similarity:272/564 - (48%) Gaps:47/564 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DEAFDLDDLLPTIGEFGKYQK----LLVFG-ICLPACIPCGFCAFNQLFMADTPDDYWCRIPELL 90
            |:::  |:::...|..||:|:    |..|| ||..:      .::..:.:|.....:.|.:|.:.
Mosquito     5 DDSY--DEIMAQAGNDGKFQRRYNLLFNFGAICFAS------MSYMSIILALNKPPHNCFVPGME 61

  Fly    91 DLPLEQR---KSLSIPKELDN-DELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQ 151
            ...:...   |:|::|:|.|| .:|.||||..|.:....|.....|...      ||..:|.|..
Mosquito    62 QYNITDANLWKNLTLPRETDNRGQLGYSKCQMYNITEQHLQRHYSEWSF------ASSDIIDCAY 120

  Fly   152 GWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATL 216
            |:||:.:....:.:.::|.:||:....|........|...|..:||.|.|..|||..:::.:..:
Mosquito   121 GYEYDRTYYDRTPITEYDWICDKGFRETNIFIYNRLGELFGTVIFGHLGDTLGRRPVFYLSILII 185

  Fly   217 LAGSLMTSLSKDFWTWAGSRVIVG-LTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIML 280
            ..|.|::..:..::.......:|| ||..:::|.|.||::|:.....|..:::|.|..:|:|:.:
Mosquito   186 TVGRLVSMFTAAYYVVFCIAAVVGSLTAHSIFQAPLIIAMEISKSERRGHISMMQCIGWTTGLCI 250

  Fly   281 LSGVTYLERDWVRLSYITSLPFYAYFLYMFVMP---ESPRWLLMRGRLEEALKILERMAKVNG-R 341
            |..|.:..:||.....|.::|.   .|:||:..   ||||||..||...||:....::|.:|| |
Mosquito   251 LPMVFWATKDWFWALLIVTMPI---VLFMFIPSYTIESPRWLATRGNYREAMVQFRKIATINGIR 312

  Fly   342 E--FPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSY 404
            |  |.|.|..|..|..|.||:         .|||.|.....|...|:|:.|.|......|..|..
Mosquito   313 ELAFDERVLEKRLANHRTDKV---------YGLASLFNGWRMAKNTMLVILCWTVCSVTYFTLVL 368

  Fly   405 YGPALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDE- 468
            ....:..|.:::|....::|:|:........|.:|||...::::......|::.|::..|..:| 
Mosquito   369 LSSRMDGNPFLNFMYQGLIEVPAAFAGQRAADRFGRRATNAMALCCATAVCLVLVLIVRDPANEM 433

  Fly   469 -TLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGL-GLIGIPFITYLGKD-NLK 530
             ..||....|..:|.:|..:...:.|:|||.:|..|:...:....: |::| |::.:||.: :::
Mosquito   434 AATVLTTFVKFCISITFFGVNLQSIEIYPTCLRQTGMAVGTIAATIFGIVG-PYVVHLGTEYDVR 497

  Fly   531 LPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQF 574
            .|.::||..|.:|.:..|.||||||..||.||||.::||||.:|
Mosquito   498 YPFLVMGLSSAVGILAALFLPETLHQSLPNTIEEAQKFGKNQRF 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 109/409 (27%)
xylE <306..>342 CDD:182225 16/39 (41%)
LOC1273930XP_003436715.2 None

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