DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and LOC1271055

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_061512323.1 Gene:LOC1271055 / 1271055 VectorBaseID:AGAMI1_001179 Length:596 Species:Anopheles gambiae


Alignment Length:519 Identity:111/519 - (21%)
Similarity:200/519 - (38%) Gaps:138/519 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LLESGEEDDLTTME---PNASWPLIKCPQGWEYNT-SVVWSSIVIDFDLVCDQDIYPTIGLAALN 186
            |:.:.||.|:.:|.   |:|...|       :.|| |..|.:.:|            .||:.   
Mosquito   119 LVSTSEEMDVISMSFILPSAQCDL-------DLNTQSKGWLNSII------------FIGMM--- 161

  Fly   187 TGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLM-------TSLSKDFWTWAGSRVIVGLTI- 243
                .|.|::|.:.|..||:       ..|:..|:|       :|.|:.:..:...|.:.|:.: 
Mosquito   162 ----FGAYIWGSVADSLGRK-------KVLIVISIMNAFCIVASSFSQTYEVFMVFRFLNGVALG 215

  Fly   244 ---PAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYL--------------ERDW 291
               |.::  |:.  .|...::.|..:......|:|.|.:|::|:.:|              ...|
Mosquito   216 GSGPVIW--PYF--AEFQPKSKRGSMLSFMAAFWTIGNLLVAGLAWLIIPTGIGITTPAFTYNSW 276

  Fly   292 VRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVN-GR---EFP-------E 345
            .....:.|:|.:.....:..:||||::||.:|:::|||.|...:...| |:   ::|       |
Mosquito   277 RIFLLVCSIPSFIVAALLLYLPESPKFLLSQGKIDEALAIFRGIYVTNTGKSKDQYPVRELLIDE 341

  Fly   346 AVHLKLEAQIRRDKLKKQKKKMANVGLADLC-------RTPNMRLKTILITLSWFANETVYLGLS 403
            .:..:|||..:  .:|.:.|:|    |.|:.       .:|.::...|.||:: |.....|.||.
Mosquito   342 CLREELEAVTK--PIKNKYKRM----LYDILDNSKQVFMSPILKFTIISITIN-FTFHIGYYGLM 399

  Fly   404 YYGPALGTNQYVSF---------------------------------------FLSAVV----EL 425
            .:.|.| .|::..|                                       |:.:::    .|
Mosquito   400 MWFPEL-FNRFDEFTRAHPGVEDASVCQVTDYVVGMGSHSQTGVCSATIPSTVFMESLITVAAAL 463

  Fly   426 PSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASFLIIYPF 490
            |:.:.....||..||::.|..|.:..| ||..::....:. .:.|.:..:...::|.....:...
Mosquito   464 PANVIAVLGMDRLGRKFFLVFSTMAAG-ACSASMYFVTNQ-HQNLAVSAIFSGVISMGNASLDCL 526

  Fly   491 AGELYPTQVRGIGIGASSYIGGL-GLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPET 553
            ..|::||.:|..|:..|.....| |:||...|..|.......|..|:..|...||:..|.||.|
Mosquito   527 ITEVFPTNLRATGVAISMVAARLGGIIGNVVIATLLDLYCPAPTFIVAVLLAGGGLMCLFLPNT 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 100/486 (21%)
xylE <306..>342 CDD:182225 13/39 (33%)
LOC1271055XP_061512323.1 None

Return to query results.
Submit another query.