DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and Slc22a13

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_598741.2 Gene:Slc22a13 / 102570 MGIID:2143107 Length:551 Species:Mus musculus


Alignment Length:546 Identity:155/546 - (28%)
Similarity:259/546 - (47%) Gaps:53/546 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIP----ELLDLPLEQRKS 99
            ::..:|:||::|..|...:.:|..: ..|..|.|:||. ..:.:.|.:.    ...:|...::.:
Mouse     7 VMAEVGDFGRFQVRLTILMGIPNFL-AAFFIFGQVFMV-LDEAHHCSVSWVKNHTFNLSAAEQLA 69

  Fly   100 LSIPKELDNDELVYSKCYTYGVNWTQLL-----ESGEEDDLTTMEPNASWPLIKCPQGWEYNTSV 159
            :|||    ||        |.|...:.|:     :|...:|:.:...|.:.   .|..||:|..:.
Mouse    70 ISIP----ND--------TAGRPESCLMFRPPPDSASLEDILSHRFNETQ---ACDSGWDYPENR 119

  Fly   160 VWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAG--SLM 222
            . .|:..:||||||:........:....|..||..:||.:.|..|||.|  :.:..||:|  |:.
Mouse   120 P-QSLKKEFDLVCDRKNLKKTSQSVFMAGLLVGALVFGPVCDWIGRRPS--LLMQVLLSGITSMA 181

  Fly   223 TSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISL-----ELVGENYRSFVTVMTCTFYTSGIMLLS 282
            |:....|..:...|.::     |.....|::|.     |.||.::|:...|:..:....|.|:|:
Mouse   182 TAFVSSFELYLALRFVL-----ATANAGFLLSTNVLISEWVGPSWRTQAVVLAQSNVALGQMVLA 241

  Fly   283 GVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREF-PEA 346
            |:.|..|:|..|....:.|....|.|.:|:||||||||.:||.|||.:::::.|.||||.. ||.
Mouse   242 GLAYGVRNWRLLQITGTAPVLLLFFYFWVLPESPRWLLSQGRTEEAKQLVQKAALVNGRPLSPEL 306

  Fly   347 VHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGT 411
            :          ::|..:|...:...| ||.|.|::|..|:::...||.:..||..||:.....|.
Mouse   307 L----------NQLVPEKTGPSGNAL-DLFRHPHLRKVTLILIAVWFVDSLVYYSLSFQVGDFGL 360

  Fly   412 NQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVS 476
            :.||:..:...||:|........|:..||:|....::.|.|:..:|.:.:|.|......||.:|.
Mouse   361 DIYVTQLIFGAVEMPGRFLSVLMMEKLGRKWSQLCTLTLAGIMYIIIIFIPGDLPTVVTVLAVVG 425

  Fly   477 KALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSM 541
            |...:|:|.|.|.:..||:||.:|..|:|..|....:|.|..|.:..|.:.:..:|:||.|.|.:
Mouse   426 KFASAAAFTISYVYTAELFPTIIRQTGMGLVSIFSRVGGIITPLVMLLEQYHQAIPMVIFGSLPI 490

  Fly   542 LGGMTGLRLPETLHHRLPQTIEEGEE 567
            ..|:....||||....|..|:::.|:
Mouse   491 GAGLLCALLPETRGQTLKDTLQDLEQ 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 153/533 (29%)
MFS 182..551 CDD:119392 113/376 (30%)
Slc22a13NP_598741.2 2A0119 12..510 CDD:273328 153/533 (29%)
MFS 139..500 CDD:119392 113/378 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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