DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and slc22a13

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_031760340.1 Gene:slc22a13 / 100491580 XenbaseID:XB-GENE-959647 Length:547 Species:Xenopus tropicalis


Alignment Length:540 Identity:163/540 - (30%)
Similarity:272/540 - (50%) Gaps:36/540 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTP-----DDYWCRI--PELLDL 92
            |..::|..:||||::||.||..:.|.:.:. .|..|:|:|| :.|     |..|..:  |.|.: 
 Frog     3 DFAEILKNVGEFGRFQKQLVVVLSLLSFLN-AFHMFSQVFM-EIPVPHRCDSRWILLINPNLTE- 64

  Fly    93 PLEQRKSLSIPKELDNDELVYSKCYTYG-VNWTQLLESGEEDDLTTMEPNASWPLIKCPQGWEYN 156
              .:|.:.:||::....   |.:|..|. |.|.  :||.|:..|.:..|        |..||||:
 Frog    65 --AERLNYTIPRDGRGQ---YEQCLMYSPVQWD--MESIEKFGLNSTGP--------CQDGWEYD 114

  Fly   157 TSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSL 221
            ||...|::|..|||||.:.....|..:...:|..:|..|||.|.||.|||....:.:...|...|
 Frog   115 TSEQKSTLVTQFDLVCHRREQTGISQSVYMSGLLIGALLFGPLGDRIGRRPVILLSMLLQLVFGL 179

  Fly   222 MTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTY 286
            ..:.:..|:.:...|.:||.::..:.....::..|.||.:.|:..|:.....:..|:|.|:||:|
 Frog   180 SAAFAPHFYVYTAFRWVVGTSMSGLMINNLVLGAEWVGSSRRACATITAHVCFAVGLMALAGVSY 244

  Fly   287 LERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKL 351
            ..|:|..|..::|.|....|.|::|:|||.||||.:|:.|:|:|:|::.|.:|.:|.||    .|
 Frog   245 GIRNWRLLQIVSSAPTALLFFYIWVLPESARWLLTKGKKEKAVKLLKKAAAMNKKEIPE----DL 305

  Fly   352 EAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYVS 416
            ..|...:|..|      :..:.||.|...:|..|:::.|.||.|..||.|||....:.|.:.|::
 Frog   306 LFQFNEEKSPK------SGNMIDLFRNKTLRKLTLVMCLVWFVNSLVYYGLSLNVGSFGLDIYLT 364

  Fly   417 FFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLS 481
            ..:...||:|:.:...:.:..:||:......:.|||..|:|...:|.:......:|.::.|..::
 Frog   365 QLVFGAVEIPARIGAMFAVQLFGRKPSQMFCLFLGGTVCLIITAIPRNLPIAITILAVIGKFSIA 429

  Fly   482 ASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMT 546
            :||.|.|.:|.|::||.:|..|:|.:|....:..|..|.|:.|.|.:..:|:.|.|...::||:.
 Frog   430 SSFSICYIYAAEVFPTVIRQNGVGLASMAARVAGITAPLISLLDKYHAAIPMAIYGSGPIIGGIL 494

  Fly   547 GLRLPETLHHRLPQTIEEGE 566
            ...||||.:..|....::.|
 Frog   495 CFLLPETRNKDLQDHTQQDE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 122/398 (31%)
xylE <306..>342 CDD:182225 17/35 (49%)
slc22a13XP_031760340.1 2A0119 12..509 CDD:273328 160/524 (31%)

Return to query results.
Submit another query.