DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and slc22a2

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_002933908.1 Gene:slc22a2 / 100487774 XenbaseID:XB-GENE-965056 Length:544 Species:Xenopus tropicalis


Alignment Length:547 Identity:166/547 - (30%)
Similarity:268/547 - (48%) Gaps:39/547 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQL-----FMADTPDDYWC---RIPELLDLP 93
            |:||..||||..:||.:...:|..:.:      |:.:     |:...| ||.|   .|||..: .
 Frog     5 DELLEHIGEFDAFQKQIFILLCFISVV------FSPIYVGIVFLGFVP-DYRCVSAGIPEPSN-E 61

  Fly    94 LEQRKSLSIPKELDNDELVYSKCYTYGVNW--TQLLESGEEDDLTTMEPNASWPLIKCPQGWEYN 156
            .|...:.:.|.. ..|.|..|:||.|.|:|  |.|..:....::|     :..|:..|..||:||
 Frog    62 CEWTLNYTGPNG-STDSLYMSQCYQYDVDWNSTSLNCTNSSLNIT-----SKLPITNCKDGWDYN 120

  Fly   157 TSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAG-- 219
            |:  .||:|.:|:|||..........:.:|.|..:|..:.|.:.||.||:  .|:..:.|:.|  
 Frog   121 TT--GSSLVTEFNLVCGDSWKLDFFQSCVNIGFFIGGLISGYIADRFGRK--PFLISSILITGIF 181

  Fly   220 SLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGV 284
            .::.:.:.::......|.|.|......:...:|:..|.||..:|..|.::....:|.|::|||||
 Frog   182 GILMAFAPNYPLVVTFRFIQGFVSKGCWLSGYILVAEFVGLEHRRTVGIVYQAAFTVGLLLLSGV 246

  Fly   285 TYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHL 349
            .|:...|..|....::|::.:..|.:.:|||||||:.:.|..||..|:..:||.||:..|:.:. 
 Frog   247 AYVLPHWRWLQMTVTIPYFFFLAYYWCVPESPRWLISQNRKAEAKAIIHTIAKKNGKMVPDFLE- 310

  Fly   350 KLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGTNQY 414
                .:..|:...:|:..:   ..||.|||.:|..|:::...||....||.|...:..:...|.|
 Frog   311 ----SLTADEEAGEKQVPS---FLDLVRTPQIRKHTLILMYIWFTCAVVYQGSIMHMGSTAENIY 368

  Fly   415 VSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKAL 479
            ..||:||:||.||.:.....:|..|||:|..:..|:.|:.|:||..:|.......:.|..||:..
 Frog   369 FDFFISALVEFPSAILIIVTVDRVGRRYPWLVCCIITGITCLITAFIPHGYSWLIITLSCVSRMG 433

  Fly   480 LSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITY-LGKDNLKLPLVIMGFLSMLG 543
            ::.|:.::.....|||||.:|.:||...|.:..||.:..|||.| |.....:|||::...|:.:.
 Frog   434 ITVSYEMVCLVNAELYPTFIRNLGIMVCSSMCDLGGVITPFIVYRLAAIWQELPLIVFAVLATVS 498

  Fly   544 GMTGLRLPETLHHRLPQTIEEGEEFGK 570
            |:....||||....||:||||.|...|
 Frog   499 GILVYFLPETKGRALPETIEEAENLHK 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 120/401 (30%)
xylE <306..>342 CDD:182225 16/35 (46%)
slc22a2XP_002933908.1 2A0119 12..516 CDD:273328 156/529 (29%)

Return to query results.
Submit another query.