DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9316 and si:ch211-214j8.12

DIOPT Version :10

Sequence 1:NP_610051.2 Gene:CG9316 / 35333 FlyBaseID:FBgn0032878 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001091661.1 Gene:si:ch211-214j8.12 / 100000539 ZFINID:ZDB-GENE-060526-102 Length:627 Species:Danio rerio


Alignment Length:462 Identity:90/462 - (19%)
Similarity:137/462 - (29%) Gaps:215/462 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 QKESLLVEF-VKEYCPNLEEI---SYSNA-TDEFHYRSIMSKMTHLKRVTIECLDAEDVLNFDMQ 182
            :|.|.|:.. ::....|::|:   .|:.. .|::.:|.||..                   |.:.
Zfish    27 EKPSTLIGLCLQSLAENMKELWAKDYAQKYMDQYFFRYIMGP-------------------FSLL 72

  Fly   183 PNQELEFFELVNGCYTGQNLCGFPNLKTLVLRDCLLWNSMEFGIPLKSLHTLDLDDCCFEVMNVS 247
            |.:.||  ||:  |.....     ||.|......||         |..|.:|.|...| .::|.|
Zfish    73 PGELLE--ELL--CILSSR-----NLLTRAALHLLL---------LPQLSSLSLASAC-SLVNAS 118

  Fly   248 LYQKIAESCTNLVELIFSG----------------------------CDTNFEVIANL--PKLE- 281
            |...|...|.||..|..||                            ||.....:.:|  |||: 
Zfish   119 LCSLIQIRCQNLQSLDLSGSQNISASVLCELLGSQHRLRSLSLAGTLCDQKVMSVLSLQCPKLKH 183

  Fly   282 ----RC-------------------TLKTWMTSNELNIGFLTVLAEKRGNKLTH----------- 312
                ||                   :..|..:...|:||    |||..|:.::.           
Zfish   184 LDVSRCLHLTPAGLLPLAYREAHVNSTNTISSLLALDIG----LAENEGDAVSAVAFLLLSLPGL 244

  Fly   313 -------------LHLSGQFNITNEH-----ARCLGQL---------SSLT---DLRFS------ 341
                         |.|:.:|..|.|.     .:||..|         ||::   :.||:      
Zfish   245 QRLAVEGLGQACVLILNREFEGTEEFTSREGVQCLKDLWAKKTLDGRSSMSANGEERFTLEGKLD 309

  Fly   342 --------------------------NNDILDDDHFKFFNDLSQLERFGLTACGRVMDVGMMRML 380
                                      .:.|:.|:......|:..|....|.|.|:|         
Zfish   310 ECLSLDESESRVNEWTGTSKECDEKVRSHIVSDNVTTCLKDVQGLSLDTLEAVGKV--------- 365

  Fly   381 RKCPQLKVIDLTDCEQITEEFVIQAIGF-----CSKGSGRDVVLNVKGTMIRRPILTHPDYVNSL 440
              ||:|:|:.| ||.|    .::.|..|     .::|.||                    :...|
Zfish   366 --CPELRVLSL-DCLQ----NIVNADSFEHGAVLARGLGR--------------------FSGQL 403

  Fly   441 NRLKVNF 447
            |.|.:.|
Zfish   404 NSLSLQF 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9316NP_610051.2 LRR <199..>366 CDD:443914 52/293 (18%)
leucine-rich repeat 208..221 CDD:275381 4/12 (33%)
leucine-rich repeat 231..258 CDD:275381 9/26 (35%)
leucine-rich repeat 259..279 CDD:275381 7/49 (14%)
leucine-rich repeat 280..309 CDD:275381 11/52 (21%)
AMN1 310..>411 CDD:187754 30/178 (17%)
leucine-rich repeat 310..334 CDD:275381 8/61 (13%)
leucine-rich repeat 335..359 CDD:275381 5/58 (9%)
leucine-rich repeat 360..385 CDD:275381 6/24 (25%)
si:ch211-214j8.12NP_001091661.1 AMN1 122..>201 CDD:187754 15/78 (19%)
leucine-rich repeat 130..155 CDD:275381 4/24 (17%)
leucine-rich repeat 156..180 CDD:275381 3/23 (13%)
leucine-rich repeat 181..215 CDD:275381 4/33 (12%)
leucine-rich repeat 216..243 CDD:275381 7/30 (23%)
leucine-rich repeat 314..368 CDD:275381 9/64 (14%)
leucine-rich repeat 403..427 CDD:275381 4/8 (50%)
leucine-rich repeat 428..453 CDD:275381
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.