Sequence 1: | NP_477119.1 | Gene: | Hr38 / 35332 | FlyBaseID: | FBgn0014859 | Length: | 1078 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_077364.2 | Gene: | Nr4a1 / 79240 | RGDID: | 620029 | Length: | 597 | Species: | Rattus norvegicus |
Alignment Length: | 656 | Identity: | 274/656 - (41%) |
---|---|---|---|
Similarity: | 366/656 - (55%) | Gaps: | 136/656 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 466 LQLISPIGGPLSCGSSLPSFQE-------------TYSLKYNSSSGSSPQQASSSSTAAPTPTDQ 517
Fly 518 VLTLKMDE----DCFP-PLSGGWSASPPAPSQLQQLHTLQSQAQMSHPNSSNNSSNNAGNSHNNS 577
Fly 578 GGYNYHGHFNAINASANLSPSSSASSLYEYNGVSAADNFYGQQQQQQQQSYQQHNYNSHNGERYS 642
Fly 643 LPTFPTISELAAATAAVEAAAAATVSSPSVGGPPPVRRASLPVQRTVSPAGSTAQSPKLAKITLN 707
Fly 708 -----QRHSHAHAHALQLNSA-PNSAASSPASADLQAGRLLQAP--------------SQLCAVC 752
Fly 753 GDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKE 817
Fly 818 VVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPDPSCLDYSHYEEQSM----- 877
Fly 878 SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKL 942
Fly 943 IFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQL 1007
Fly 1008 QMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMF 1072
Fly 1073 VTTLPF 1078 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr38 | NP_477119.1 | NR_DBD_NGFI-B | 747..821 | CDD:143527 | 63/73 (86%) |
NR_LBD_DHR38_like | 849..1078 | CDD:132757 | 127/233 (55%) | ||
Nr4a1 | NP_077364.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..22 | ||
Required for nuclear import. /evidence=ECO:0000250|UniProtKB:P22736 | 170..465 | 159/307 (52%) | |||
NR_DBD_NGFI-B | 265..338 | CDD:143527 | 63/72 (88%) | ||
Required for the interaction with RXRA. /evidence=ECO:0000250|UniProtKB:P22736 | 298..360 | 53/64 (83%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 341..360 | 15/21 (71%) | |||
NR_LBD_NGFI-B | 360..597 | CDD:132762 | 128/236 (54%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166341058 | |
Domainoid | 1 | 1.000 | 237 | 1.000 | Domainoid score | I2249 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4217 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D216479at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001568 | |
OrthoInspector | 1 | 1.000 | - | - | otm45775 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105775 | |
Panther | 1 | 1.100 | - | - | O | PTHR24085 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X978 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.710 |