DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr38 and NR2F6

DIOPT Version :10

Sequence 1:NP_477119.1 Gene:Hr38 / 35332 FlyBaseID:FBgn0014859 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_005225.2 Gene:NR2F6 / 2063 HGNCID:7977 Length:404 Species:Homo sapiens


Alignment Length:409 Identity:123/409 - (30%)
Similarity:191/409 - (46%) Gaps:91/409 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   722 SAPNSAASSP-ASADLQAGRLLQAPSQL-CAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYV 784
            :|.:.:||.| |::|.:.|...:...|: |.||||.::.:||||.||||||.||||::::...|.
Human    27 AAEDDSASPPGAASDAEPGDEERPGLQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYT 91

  Fly   785 CLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLP-SKPKSPQESPPSPPIS 848
            |.::::|.:|:..||:||:||.:||..|||.||.|       :|||:| |.|.:...|..|||.|
Human    92 CRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAV-------QRGRIPHSLPGAVAASSGSPPGS 149

  Fly   849 LITALVRSHVDTTPDPSCLDYSHYEEQSMSE------------------------------ADKV 883
            .:.| |.|..|..|.           |.:||                              .|.|
Human   150 ALAA-VASGGDLFPG-----------QPVSELIAQLLRAEPYPAAAGRFGAGGGAAGAVLGIDNV 202

  Fly   884 QQF-YQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNG 947
            .:. .:||.|:|    ::|...|.:.:|...||..|.:.:..|||||..|..|            
Human   203 CELAARLLFSTV----EWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAA------------ 251

  Fly   948 TVLHRTQCLRSFG------------EWLNDIMEFSR---SLHNLEIDISAFACLCALTLIT-ERH 996
            ..||....|.:.|            .:::.:..|..   .|..|::|.:.:.||.|:.|.| :..
Human   252 LPLHTAPLLAAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDAC 316

  Fly   997 GLREPKKVEQLQMKIIGSLRDHV--TYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLE 1059
            ||.:|..||.||.|...:|.::|  .|.::.|:    |.|||.:||.||::....:.::|:::|.
Human   317 GLSDPAHVESLQEKAQVALTEYVRAQYPSQPQR----FGRLLLRLPALRAVPASLISQLFFMRLV 377

  Fly  1060 DLVPAPALIENMFVTTLPF 1078
            ...|...||.:|.::...|
Human   378 GKTPIETLIRDMLLSGSTF 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr38NP_477119.1 NR_DBD_NGFI-B 747..821 CDD:143527 38/74 (51%)
NR_LBD_DHR38_like 849..1078 CDD:132757 66/277 (24%)
NR2F6NP_005225.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 7/21 (33%)
NR_DBD_COUP_TF 56..128 CDD:143516 37/78 (47%)
NR_LBD_COUP-TF 165..400 CDD:132746 61/252 (24%)
Important for dimerization. /evidence=ECO:0000250 327..404 22/74 (30%)

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