Protein Alignment Hr38 and nr4a3

DIOPT Version :9

• Sequence 1: NP_477119.1
• Gene: Hr38 / 35332
• FlyBaseID: FBgn0014859
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: XP_031760505.1
• Gene: nr4a3 / 100497512
• XenbaseID: XB-GENE-493441
• Length: 595
• Species: Xenopus tropicalis
• Alignment Length: 639
• Identity: 255/639 - (39%)
• Similarity: 335/639 - (52%)
• Gaps: 134/639 - (20%)

  Fly   529 PPLSGGWSASPPAPSQLQQLHT----LQSQAQMSHPNSSNNSSNNAGNSHNNSGGYNYHGHFNAI 589
            |.:...:|.|||..:.:.|.::    |..|...|:.:..|...|..|                 |
 Frog     2 PCMQARYSPSPPVSTFITQHYSHGSELSKQLISSYHSKVNMDLNCTG-----------------I 49

  Fly   590 NASANLSPSSSASSLYEYNG--VSAADNFYGQQQQQQQ-----QSYQQHNYNSHNGERYSLPTFP 647
            .|||..|..|.:|.:..|:|  .......|..|...|:     :||...||.            |
 Frog    50 TASATTSLPSFSSFMDGYSGSYEHKPSCLYQMQASSQRSLIKLESYHPINYQ------------P 102

  Fly   648 TISELAAATAAVEAAAAATVSSPSV---GGPP-----PVRRASLPVQ----RTVSPAGSTAQSPK 700
            :||:           .|..:||||:   ..||     |...|.|..:    .|:.|:.|...|..
 Frog   103 SISQ-----------QANVMSSPSMYFKQSPPSTPTTPEYPAHLSPRWEQLDTLPPSQSCINSGP 156

  Fly   701 LAKI---TLNQRHSHAHAHALQLNSAPNSAASSPASADLQAGRLL-------------------- 742
            |.:.   |:..::.:.|.....||   |..::|....||....||
 Frog   157 LVETLLKTVTPQYPNFHLKYSPLN---NPISNSRMCYDLSQSILLCPEGVSAHGAMDHLPYNLPI 218

  Fly   743 -----------------------QAPSQ---------LCAVCGDTAACQHYGVRTCEGCKGFFKR 775
                                   ..||.         .||||||.||||||||||||||||||||
 Frog   219 TKGSNLIFSSLGSTHNVAVSGDGNLPSPPIRKTSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKR 283

  Fly   776 TVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQ- 839
            ||||.:||||||:||||||||||||||:|||||||.|||||||||||:|||||||||||||||.
 Frog   284 TVQKKAKYVCLANKNCPVDKRRRNRCQYCRFQKCLNVGMVKEVVRTDNLKGRRGRLPSKPKSPNL 348

  Fly   840 -----ESPPSPPISLITALVRSHVDTTPDPSCLDYSHYE---EQSM--SEADKVQQFYQLLTSSV 894
                 :.|.:.|..::.|||.:..|:|  .:.||||.|.   :|:.  ::.:.|.|||.|||.|.
 Frog   349 HETSLQVPSTTPAGILNALVHALADST--STDLDYSTYSTTTDQAAEGNDTESVHQFYNLLTISF 411

  Fly   895 DVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSF 959
            :|.|::|||:||:.:|..:||.||.:|..||||:|||:.|:.:.:.:.:||||.||||.||||.|
 Frog   412 EVTKKWAEKLPGFKELSKDDQTLLIESTFLELFILRLSVRSNMAEDEFVFCNGCVLHRIQCLRGF 476

  Fly   960 GEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAE 1024
            ||||:.:..||.:|.:|.:|:|..|||.|..|.|.|.||::|||||:|..||:|.|::|:....:
 Frog   477 GEWLDAVQHFSLNLQSLNLDVSTVACLSAACLFTGRQGLKDPKKVEELHNKIVGCLKEHLAVRGQ 541

  Fly  1025 AQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 1078
            .:..|...:.::..|.|||||...|||||||||||||||.||:|:.:|..|||:
 Frog   542 NRPNQLDSTVVMCILTELRSLCTLGLQRIFYLKLEDLVPPPAVIDKLFFDTLPY 595

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr38	NP_477119.1	NR_DBD_NGFI-B	747..821	CDD:143527	65/82 (79%)
		NR_LBD_DHR38_like	849..1078	CDD:132757	111/233 (48%)
nr4a3	XP_031760505.1	NR_DBD_NGFI-B	255..329	CDD:143527	65/73 (89%)
		NR_LBD	360..595	CDD:416257	112/236 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D216479at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010