DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2617 and LUL1

DIOPT Version :9

Sequence 1:NP_001260636.1 Gene:CG2617 / 35331 FlyBaseID:FBgn0032877 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_195940.1 Gene:LUL1 / 831908 AraportID:AT5G03200 Length:337 Species:Arabidopsis thaliana


Alignment Length:100 Identity:31/100 - (31%)
Similarity:53/100 - (53%) Gaps:7/100 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 LIYLLQRGRIEISTKTQSVYLWTHHKLQHFIHNVWYVSENA--GSASPERCVVCMAQSRNVVVMP 237
            ::|..::|.|:|....|  .||.:.:....:.  .|..||.  ||...:.||||:::.|:..|:|
plant   239 VVYTKEKGEIKIEVVKQ--ILWVNKRRYELLE--IYGIENTVDGSDEGKECVVCLSEPRDTTVLP 299

  Fly   238 CRHLCLCKECSLQLVLLLEDRCPVCRHNITSFLSV 272
            |||:|:|..|: :.:....:.|||||..:...|.:
plant   300 CRHMCMCSGCA-KALRFQTNLCPVCRQPVEMLLEI 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2617NP_001260636.1 zf-C3HC4_3 223..269 CDD:290631 18/45 (40%)
LUL1NP_195940.1 zf-C3HC4_3 281..328 CDD:290631 18/47 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22996
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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