DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG2617 and Rnf157

DIOPT Version :9

Sequence 1:	NP_001260636.1	Gene:	CG2617 / 35331	FlyBaseID:	FBgn0032877	Length:	274	Species:	Drosophila melanogaster
Sequence 2:	XP_038943400.1	Gene:	Rnf157 / 688272	RGDID:	1591154	Length:	699	Species:	Rattus norvegicus

Alignment Length:	146	Identity:	42/146 - (28%)
Similarity:	65/146 - (44%)	Gaps:	29/146 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   136 VVHSIV-------AHGLSLLNSAFRASIGLALLLVLYMFRRYVYLMLIYLLQR--GRIEISTKTQ 191
            |||::|       .|...||.:..:.|.|  ...|..:.::.|...:.||||.  | ||....||
  Rat   200 VVHAVVDEGDEYFGHCHVLLGTFEKHSDG--TFCVKPLKQKQVVDGVSYLLQEIYG-IENKYNTQ 261

  Fly   192 SVYLWTHHKLQHFIHNVWYVSENAGSASPERCVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLLE 256
            ..                .|:|:..|.:...||||::..|:.:::||||||||..|: ..:....
  Rat   262 DS----------------KVAEDDVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCA-DTLRYQA 309

  Fly   257 DRCPVCRHNITSFLSV 272
            :.||:||....:.|.:
  Rat   310 NNCPICRLPFRALLQI 325

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG2617	NP_001260636.1	zf-C3HC4_3	223..269	CDD:290631	18/45 (40%)
Rnf157	XP_038943400.1	KilA-N	<236..330	CDD:392051	32/108 (30%)
		mRING-HC-C3HC5_MGRN1_like---blasttree	276..316	CDD:319703	16/40 (40%)
		Atrophin-1	<317..>564	CDD:397323	1/9 (11%)
		fibronec_FbpA	<477..>571	CDD:411474
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22996
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010