DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2617 and CG9941

DIOPT Version :9

Sequence 1:NP_001260636.1 Gene:CG2617 / 35331 FlyBaseID:FBgn0032877 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_572915.1 Gene:CG9941 / 32330 FlyBaseID:FBgn0030514 Length:789 Species:Drosophila melanogaster


Alignment Length:132 Identity:33/132 - (25%)
Similarity:59/132 - (44%) Gaps:29/132 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 RYVYLMLIY-LLQRGRIEISTKTQSVYLWTHH-----------KLQHFIHNVWYVSE-------- 213
            |..|.:.|: :::.|..|......::.:..||           |.:.|:..:.|:.:        
  Fly   237 REQYPVAIHCVVEEGSDECRQSHTTICVIDHHPENGSYVLRALKQKIFVDGLCYLLQEIYGIENK 301

  Fly   214 --NAGSASPE------RCVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLLEDRCPVCRHNITSFL 270
              |..|...|      .||:||:::|:.:::||||||||..|:..| ....:.||:||....:.|
  Fly   302 AVNKTSLDEEIDDHGSECVICMSETRDTLILPCRHLCLCNSCADSL-RYQANNCPICRAPFRALL 365

  Fly   271 SV 272
            .:
  Fly   366 QI 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2617NP_001260636.1 zf-C3HC4_3 223..269 CDD:290631 19/45 (42%)
CG9941NP_572915.1 zf-C3HC4_3 318..360 CDD:290631 19/42 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4265
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22996
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.