DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2617 and C11H1.3

DIOPT Version :9

Sequence 1:NP_001260636.1 Gene:CG2617 / 35331 FlyBaseID:FBgn0032877 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_510385.1 Gene:C11H1.3 / 181537 WormBaseID:WBGene00007529 Length:529 Species:Caenorhabditis elegans


Alignment Length:41 Identity:17/41 - (41%)
Similarity:28/41 - (68%) Gaps:1/41 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 CVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLLEDRCPVCR 263
            |::|::..|:.|::||||||:|..|:..| ....:.||:||
 Worm   269 CIICLSDIRDTVILPCRHLCVCSNCADSL-RYKHNNCPICR 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2617NP_001260636.1 zf-C3HC4_3 223..269 CDD:290631 17/41 (41%)
C11H1.3NP_510385.1 RAD18 264..>353 CDD:227719 17/41 (41%)
mRING-HC-C3HC5_MGRN1_like---blasttree 268..308 CDD:319703 15/39 (38%)
DUF4887 382..522 CDD:374444
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22996
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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