DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cen and Cdr2

DIOPT Version :9

Sequence 1:NP_610049.1 Gene:Cen / 35330 FlyBaseID:FBgn0032876 Length:790 Species:Drosophila melanogaster
Sequence 2:NP_031698.2 Gene:Cdr2 / 12585 MGIID:1100885 Length:455 Species:Mus musculus


Alignment Length:530 Identity:127/530 - (23%)
Similarity:211/530 - (39%) Gaps:150/530 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DLQLAAELGKTLLERNKELETFIKEYKIKGDEQELEILHLRKHINAMTEVNDSRLKVYEQLEVGI 85
            |||||||||||||:||.|||..:::......||..||.:|.|.:..:.::|:...||||||:|..
Mouse    26 DLQLAAELGKTLLDRNTELEDSLQQMYTTNQEQLQEIEYLTKQVELLRQMNEQHAKVYEQLDVTA 90

  Fly    86 QDLERANQRLNLEKNRDKKQIKTLT-------TNTEVLEARCEEL-SQLLSDARQSLSTERRKVD 142
            ::||..||:|..|....:::|.:||       ||.:.|:::.||| |......||....:.:...
Mouse    91 RELEETNQKLVAESKASQQKILSLTETIECLQTNIDHLQSQVEELKSSSQGRGRQKACDQEKPAP 155

  Fly   143 QYQ--QERYRM-QHSTEGSVSSHSIQSLCKEQSVEFSKLDVMAIANSTGLEDISFSNATMCERTA 204
            .:.  :|.|.: ||.....|.:..|.||..:||.:                              
Mouse   156 SFSCLKELYDLRQHFVYDHVFAEKITSLQSQQSPD------------------------------ 190

  Fly   205 VKGEDNEELVKLLSEMEVLKRDFLAEQQRCTELEEQLVTIIQDNQGLQTRLLENSANEGTMSMHE 269
              .|:||.|.|.::   :|:.....|:::...:|.:...::::|..|:.:|....|..       
Mouse   191 --EEENEHLKKAVT---MLQAQLSLERKKRVSVEAEYKVVLKENSELEQQLGATDAYR------- 243

  Fly   270 EFSLLDDVRQGQMCSRCLRDINESNTNMDDQSSIAPTEEIYEDDDRSILSESTSKCDNSGADYKE 334
                          :|.|          :.::.:|...::.:.:...:          :|.    
Mouse   244 --------------ARAL----------ELEAEVAEMRQMLQAEHPFV----------NGV---- 270

  Fly   335 RFRIPEDLNPNSSDKP--NPYRDLVEKYEALVEVKRTSNAVKSNFTSNPDG--KTMTESSQGKKS 395
                 |.|.|:|...|  .|.:.|:|:.                |.:.|:.  |.:..||    |
Mouse   271 -----EKLVPDSLFVPFKEPSQSLLEEM----------------FLAAPEAPRKPLKRSS----S 310

  Fly   396 ETIVNSSKESDLMLD----------STRKRTPTEFSESETTSSGF--------------SDETSN 436
            ||.::|....|::.|          :.::|..:...|.:|..|..              .|..|:
Mouse   311 ETALSSLAGDDIVKDHEDTCIRRAKAVKQRGISLLHEVDTQYSALKVKYEELLKKCQQEQDSLSH 375

  Fly   437 KSTQTDERPSYFLCSISNGNDCKFSIYD--DVSP--IESHFRNRPEYRELFKEIFGVLKKAADNN 497
            |:.||....:..|..:...::...|.::  .|||  |.|.....|||:.||||||..:||.....
Mouse   376 KAVQTSRLLTRDLTGLVTQSEAGASGWEPTPVSPESISSPTTTPPEYKALFKEIFSCIKKTKQEI 440

  Fly   498 EED--KLPSL 505
            :|.  |.|||
Mouse   441 DEQRTKYPSL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenNP_610049.1 SMC_prok_B <13..>255 CDD:274008 70/244 (29%)
Cdr2NP_031698.2 SMC_prok_B <19..>262 CDD:274008 75/301 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..152 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..419 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849807
Domainoid 1 1.000 95 1.000 Domainoid score I7405
eggNOG 1 0.900 - - E1_2C4BD
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 95 1.000 Inparanoid score I5045
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003445
OrthoInspector 1 1.000 - - otm42372
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR19232
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5462
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.970

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