DRSC/TRiP Functional Genomics Resources

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Protein Alignment IKKepsilon and CIPK12

DIOPT Version :9

Sequence 1:NP_610048.2 Gene:IKKepsilon / 35329 FlyBaseID:FBgn0086657 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_193605.1 Gene:CIPK12 / 827604 AraportID:AT4G18700 Length:489 Species:Arabidopsis thaliana


Alignment Length:552 Identity:132/552 - (23%)
Similarity:204/552 - (36%) Gaps:168/552 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VLGKGATGSVFQGVNKITGESVAVKTFNP--------YSHMRPADVQMREFEALKKVNHENIVKL 73
            :||.|....|:...|..|.||||:|..:.        .:|::      ||...|::|.|.|||:|
plant    31 LLGHGTFAKVYLARNVKTNESVAIKVIDKEKVLKGGLIAHIK------REISILRRVRHPNIVQL 89

  Fly    74 LAIEEDQEGRGKV-IVMELCTGGSLFN------ILDDPENSYGLPEHEFLLVLEHLCAGMKHLRD 131
            .   |....:.|: .|||...||.|||      :.::....|          .:.|.:.:.....
plant    90 F---EVMATKAKIYFVMEYVRGGELFNKVAKGRLKEEVARKY----------FQQLISAVTFCHA 141

  Fly   132 NKLVHRDLKPGNIMKFISEDGQTIYKLTDFG---AARELEDNQPFASLYGTEEYLHPDLYERAVL 193
            ..:.||||||.|::  :.|:|.  .|::|||   .:.::..:..|.:..||..|:.|::    :.
plant   142 RGVYHRDLKPENLL--LDENGN--LKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEV----LA 198

  Fly   194 RKSIQRSFTANVDLWSIGVTLYHVATGNLPFRPFGGRKNRETMHQITTKKASGVISGTQLSENGP 258
            ||...   .|.||:||.||.|:.:..|.|||..    :|...|:    ||   :..|    |...
plant   199 RKGYD---AAKVDIWSCGVILFVLMAGYLPFHD----RNVMAMY----KK---IYRG----EFRC 245

  Fly   259 IEWSTTLPPHAHLSQGLKTLVTPLLAGLLEENREKTWSFDRFFHEVTLILRKRVIHVFFTNRTSS 323
            ..|             ..|.:|.||:.|||.|.||.::|........  .:|...|:.|......
plant   246 PRW-------------FSTELTRLLSKLLETNPEKRFTFPEIMENSW--FKKGFKHIKFYVEDDK 295

  Fly   324 VEVFLEPDE----QIDNFRERIFLQTEVPLEKQILLFNNEHLEKKVTPRTIAKAFPATTTDQPIF 384
            :...::.||    .:::.|:....::|:           |:||    ||......|     :|..
plant   296 LCNVVDDDELESDSVESDRDSAASESEI-----------EYLE----PRRRVGGLP-----RPAS 340

  Fly   385 LYSNDDNNVQLPQQLDL----------PKF----PVFPPNVSVENDA-----SLAKSACSVGHEC 430
            |  |..:.:...|..||          .:|    ||......:|..|     ::.|..|.|..|.
plant   341 L--NAFDIISFSQGFDLSGLFDDDGEGSRFVSGAPVSKIISKLEEIAKVVSFTVRKKDCRVSLEG 403

  Fly   431 KRR---------VDIFTSMDILI-----KKGVEHFIEMLVTTITLLLKKTESFD--------NLL 473
            .|:         .:||.....|:     |||.:               |||..|        .|.
plant   404 SRQGVKGPLTIAAEIFELTPSLVVVEVKKKGGD---------------KTEYEDFCNNELKPKLQ 453

  Fly   474 STVIDYADVVHSMARVTKGDQEIKTLLTALEN 505
            :...|  |||.....|:..|:      ||:.|
plant   454 NLTAD--DVVAEPVAVSAVDE------TAIPN 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IKKepsilonNP_610048.2 Pkinase 16..297 CDD:278497 82/297 (28%)
STKc_TBK1 18..332 CDD:270890 86/331 (26%)
UBL_TBK1_like 299..389 CDD:240618 15/93 (16%)
CIPK12NP_193605.1 STKc_SnRK3 25..279 CDD:271133 83/305 (27%)
CIPK_C 342..453 CDD:213380 24/125 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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