DRSC/TRiP Functional Genomics Resources

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Protein Alignment IKKepsilon and ikbke

DIOPT Version :10

Sequence 1:NP_610048.2 Gene:IKKepsilon / 35329 FlyBaseID:FBgn0086657 Length:720 Species:Drosophila melanogaster
Sequence 2:XP_031752733.1 Gene:ikbke / 100487744 XenbaseID:XB-GENE-994611 Length:718 Species:Xenopus tropicalis


Alignment Length:763 Identity:263/763 - (34%)
Similarity:392/763 - (51%) Gaps:101/763 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRGSVSYVWCTTSVLGKGATGSVFQGVNKITGESVAVKTFNPYSHMRPADVQMREFEALKKVNHE 68
            ::.:.:|:|....|||:|||.||::..||.:||.||||.||..|::||.:|||||||.|:|:||.
 Frog     1 MQSTPNYLWELDDVLGQGATASVYKARNKKSGEEVAVKVFNNLSYLRPLEVQMREFEMLRKLNHV 65

  Fly    69 NIVKLLAIEEDQEGRGKVIVMELCTGGSLFNILDDPENSYGLPEHEFLLVLEHLCAGMKHLRDNK 133
            |||||.|:||....:.||:|||.|:.|||.::|:||||:|||.|.|||:||:.:.|||.|||.|.
 Frog    66 NIVKLFAVEETGNSKQKVLVMEYCSSGSLLSVLEDPENAYGLSEAEFLIVLQCVVAGMNHLRQNG 130

  Fly   134 LVHRDLKPGNIMKFISEDGQTIYKLTDFGAARELEDNQPFASLYGTEEYLHPDLYERAVLRKSIQ 198
            :||||:||||||:.|.|||::|||||||||||||:|::.|.|:||||||||||:||||||:|..|
 Frog   131 IVHRDIKPGNIMRLIGEDGRSIYKLTDFGAARELDDDEKFLSIYGTEEYLHPDIYERAVLKKPQQ 195

  Fly   199 RSFTANVDLWSIGVTLYHVATGNLPFRPFGG-RKNRETMHQITTKKASGVISGTQLSENGPIEWS 262
            :::...|||||||||.||.|.|:|||.|:|| |:|:|.||:|.|:|....|:|.|..|.|||||.
 Frog   196 KAYGVTVDLWSIGVTFYHAACGSLPFIPYGGPRRNKEIMHKIITEKPPRAIAGVQRKEKGPIEWI 260

  Fly   263 TTLPPHAHLSQGLKTLVTPLLAGLLEENREKTWSFDRFFHEVTLILRKRVIHVFFTNRTSSVEVF 327
            ..||....||.|||..:..:|..:||.::||.|.||:||.|...||.:.|:|||.....:...|:
 Frog   261 YELPISCRLSVGLKVHLENILPNILEADQEKCWGFDKFFSETNNILERIVVHVFSLPHATMHMVY 325

  Fly   328 LEPDEQIDNFRERIFLQTEVPLEKQILLFNNEHLEKKVTPRTIAKAFPATTTDQP-IFLYSNDDN 391
            :.....:.||.|.:..||.|..|.|...:...|.  .:.|....|....||...| |.:.|..|.
 Frog   326 VLACSSVVNFMEAVSKQTGVAFENQKYFYEGHHY--PMMPTLQVKHITGTTEQHPFILMSSTSDC 388

  Fly   392 NVQLPQQLDLPKFPVFPPNVSVENDASLAKSACSVGHECKRRVDIFTSMDILIKKGVEHFIEMLV 456
            .|:...:.....||.|.|:|.|..|.|:||:..|..::..|......:....|.:|....||...
 Frog   389 IVKATYKDPTNDFPRFLPSVDVVADCSIAKNVLSAVYQTLRVARALLTCQEFILRGTYWLIENTK 453

  Fly   457 TTITLLLKKTESFDNLLSTVIDYADVVHSMARVTKGDQEIKTLLTALENVKSDFDGAADV----- 516
            |....:|:|..:..:||:..|...:      |:|:       |..::.|.|.:|....|:     
 Frog   454 TECHQILEKKSTMASLLNCTISTEN------RITR-------LYNSVNNRKPEFPEFPDLAECRR 505

  Fly   517 ----------------------------ISQMHKHFVIDDELNDQWTSSMHGKKCPCKTRASAQA 553
                                        :|:......:|..:|                    :.
 Frog   506 QLQSIGHTLSSCSHIVEKQNMLEFLSLEVSKNQDQIQLDTSIN--------------------RM 550

  Fly   554 KYLVERLRDSWQHLLRDRATRTLTYNDEQFHALEKIKVDHNGKRIKALLLDNVNPTVAQIAECLA 618
            :|.:.:::..:....:.:....|.||:||.|.|:|:.:.:..|::.|:..|.|           .
 Frog   551 EYCLRKMQLIFNQFKKRKQQSRLGYNEEQLHKLDKVNLGNLAKKVLAIFQDGV-----------V 604

  Fly   619 DWYKLAQTVYLKTQILEKDVRDCERKLNG-----------IRDELYHVKSELKLDVDTKTINNNN 672
            ..||.|...:........|:......:||           .:|.:.:...:|.|.:...:..|::
 Frog   605 QKYKAALDKHSNRMSTFADILKHVDLVNGYFGGSFLDLQKYQDSVNNAVDDLTLRIQQMSEPNHS 669

  Fly   673 QLAKIEERN------RLRVMQQQQQEVMAVMRTNSDIISLLSKLGITN 714
            .|.....::      |:..::.|.:.|...::.|:   |::.:||:|:
 Frog   670 PLPSCHNQDKEDLTLRMLKLRDQMKTVSYELQQNN---SVIERLGVTS 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IKKepsilonNP_610048.2 STKc_TBK1 18..332 CDD:270890 178/314 (57%)
Ubl_TBK1_like 310..388 CDD:340518 20/78 (26%)
TBK1_CCD1 405..656 CDD:465742 51/294 (17%)
ikbkeXP_031752733.1 Protein Kinases, catalytic domain 15..327 CDD:473864 178/311 (57%)
Ubl1_cv_Nsp3_N-like 308..384 CDD:475130 20/77 (26%)
TBK1_CCD1 402..651 CDD:465742 51/292 (17%)
TBK1_IKKE-like_C 676..718 CDD:409261 8/42 (19%)

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