DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2611 and Tmem230

DIOPT Version :10

Sequence 1:NP_610043.1 Gene:CG2611 / 35324 FlyBaseID:FBgn0032871 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001041508.1 Gene:Tmem230 / 681315 RGDID:1307399 Length:120 Species:Rattus norvegicus


Alignment Length:121 Identity:32/121 - (26%)
Similarity:59/121 - (48%) Gaps:9/121 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SRHRLNGGGRSSAPAGSGEYIKVVESQCETDGFVNEQWTEPAMPGPVPWKTIIIILLLFIGGIVC 72
            ||..|..|    .|:...:|.::..:.   ||:::.|:.:  .|..:|:|.|.:..:||:.|...
  Rat     4 SRTNLATG----IPSSKVKYSRLSSTD---DGYIDLQFKK--SPPKIPYKAIALATVLFLIGTFL 59

  Fly    73 IAFATLNWVTDTSRERSDRVWALGIIGALTFIPGSYYVYVLFCIMLNRNGFTMDEI 128
            |...:|......|:..:||...:.|||.|.|:||.|::.:.:.......|::.|:|
  Rat    60 IIIGSLLLSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDI 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2611NP_610043.1 TMEM_230_134 <93..128 CDD:399128 10/34 (29%)
Tmem230NP_001041508.1 TMEM_230_134 2..118 CDD:399128 32/121 (26%)

Return to query results.
Submit another query.