DRSC/TRiP Functional Genomics Resources

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Protein Alignment phr6-4 and cry2

DIOPT Version :10

Sequence 1:NP_477188.1 Gene:phr6-4 / 35322 FlyBaseID:FBgn0016054 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_571861.2 Gene:cry2 / 83774 ZFINID:ZDB-GENE-010426-6 Length:598 Species:Danio rerio


Alignment Length:544 Identity:268/544 - (49%)
Similarity:348/544 - (63%) Gaps:38/544 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPGILDWMQVGANRWRFLQQTLEDLDN 73
            ||||||||||||||||......|:.      ||.::||||.......||.||||||.::|||||.
Zfish     6 VHWFRKGLRLHDNPALQEALNGADT------VRCVYILDPWFAGSANVGVNRWRFLLESLEDLDT 64

  Fly    74 QLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCS 138
            .|||||||||||||:|.:||||:||.|.|..||||.|.|||...||||:.|:|:..||......:
Zfish    65 SLRKLNSRLFVVRGQPTDVFPRLFKEWNVTRLTFEYDSEPYGKERDAAIIKMAQEYGVETVVRNT 129

  Fly   139 HTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEKLKNMPTPPKD-------EVEQKD 196
            ||:|||:.:|..|....|:|:::|..||.:|::|:        |.:||..::       ::....
Zfish   130 HTLYNPDRIIEMNNHSPPLTFKRFQAIVNRLELPR--------KPLPTITQEQMARCRTQISDNH 186

  Fly   197 SAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNTAPNSLEPSTTVL 261
            ...|..|::::|..|.:....:.:.|||||||.|:.:.|..:.|||.||:|..:..||.||.|.|
Zfish   187 DEHYGVPSLEELGFRTQGDSLHVWKGGETEALERLNKHLDRKAWVANFERPRISGQSLFPSPTGL 251

  Fly   262 SPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTVAAAEPNFDRMLGNVYCM 326
            ||||:|||||.|:|...|:::..:..:.|.||:||.|||:||||:||.....||||.|.||..|:
Zfish   252 SPYLRFGCLSCRVFYYNLRDLFMKLRRRSSPPLSLFGQLLWREFFYTAGTNNPNFDHMEGNPICV 316

  Fly   327 QIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRVF 391
            ||||..:|:.|..|..||||:|:|||||.||||||||||||||||||||||||||||||.|.:||
Zfish   317 QIPWDHNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGMKVF 381

  Fly   392 EQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGCIYE 456
            |:||||.||::|||:|||||.||||.|:|..|.||.||::|||.|.|||:|:|:|..||...|||
Zfish   382 EELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYIPKLKDYPNRYIYE 446

  Fly   457 PWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYK---------VNREVRTGKEE-E 511
            ||.|....|:|..|::|.|||..::.|....:.||:||...|:         :...|.|.:|| |
Zfish   447 PWNAPESVQKAANCIVGVDYPKPMINHAESSRLNIERMKQVYQQLSHYRGLSLLASVPTIQEEAE 511

  Fly   512 SSFEEKSETSTSGKRKVRRATGSA 535
            ....:.|:.|:|       :||.|
Zfish   512 PPMSDDSQASSS-------STGQA 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phr6-4NP_477188.1 PhrB 6..497 CDD:440184 256/494 (52%)
cry2NP_571861.2 PhrB 5..487 CDD:440184 256/494 (52%)

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