DRSC/TRiP Functional Genomics Resources

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Protein Alignment phr6-4 and CRY1

DIOPT Version :10

Sequence 1:NP_477188.1 Gene:phr6-4 / 35322 FlyBaseID:FBgn0016054 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_567341.1 Gene:CRY1 / 826470 AraportID:AT4G08920 Length:681 Species:Arabidopsis thaliana


Alignment Length:540 Identity:142/540 - (26%)
Similarity:230/540 - (42%) Gaps:88/540 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPGILDWMQVG-ANRWRFLQQTLEDLDNQ 74
            |||:.||:.|||||:   .|..|.|    |..:|:..|........| .:|| :|:.:|..||:.
plant    17 WFRRDLRVEDNPALA---AAVRAGP----VIALFVWAPEEEGHYHPGRVSRW-WLKNSLAQLDSS 73

  Fly    75 LRKLNSRLFVVRGKPAEV-FPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCS 138
            ||.|.:.|...|...:.. ...:.||.....:.|....:|.|:.||...:.:..|:|:.|.:..:
plant    74 LRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNA 138

  Fly   139 HTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEKLKNMPTPPKDEVEQKDSAAYDCP 203
            ..:|.| ..:...||:   .:..|....|     :.|.:|...::...|||..:....|   .|.
plant   139 DLLYEP-WEVTDELGR---PFSMFAAFWE-----RCLSMPYDPESPLLPPKKIISGDVS---KCV 191

  Fly   204 TMKQLVKRPEELGPNKF------PGGETEALRRMEESLKDEIWVARFEKPNTAPNSLEPSTTVLS 262
            ....:.:...|.|.|..      ||....     :::|...|.....|.......:...:|:.||
plant   192 ADPLVFEDDSEKGSNALLARAWSPGWSNG-----DKALTTFINGPLLEYSKNRRKADSATTSFLS 251

  Fly   263 PYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMW---------------------REFY 306
            |:|.||.:|.|    |:..:::            |.|:.|                     ||:.
plant   252 PHLHFGEVSVR----KVFHLVR------------IKQVAWANEGNEAGEESVNLFLKSIGLREYS 300

  Fly   307 YTVAAAEP-NFDR-MLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARH 369
            ..::...| :.:| :||::  ...||....::.:||..||||||.:||.||:|...||:|...|.
plant   301 RYISFNHPYSHERPLLGHL--KFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRV 363

  Fly   370 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSAS-AFFHQYFRVYSPVAFGKKTD 433
            .|:.|..: .|.:.|..|.:.|...|||.|...:|..|.:::.: ....::.|:.:|...|.|.|
plant   364 VVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFD 427

  Fly   434 PQGHYIRKYVPELSKYPAGCIYEPWKASLVDQRAYGCVLGTDYPHRIV--------KHEVVHKEN 490
            |.|.|:|:::||||:.|...|:.||.|.....:|.|..||::||..||        .||.:  ..
plant   428 PNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEAL--SQ 490

  Fly   491 IKRMGAAYKVNREVRTGKEE 510
            :.::.||.:.  .:..|.||
plant   491 MWQLEAASRA--AIENGSEE 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phr6-4NP_477188.1 PhrB 6..497 CDD:440184 137/525 (26%)
CRY1NP_567341.1 crypt_chrom_pln 15..489 CDD:131813 137/517 (26%)
Cryptochrome_C 519..622 CDD:403665
Blue background indicates that the domain is not in the aligned region.

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