DRSC/TRiP Functional Genomics Resources

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Protein Alignment phr6-4 and UVR3

DIOPT Version :9

Sequence 1:NP_001260632.1 Gene:phr6-4 / 35322 FlyBaseID:FBgn0016054 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_566520.1 Gene:UVR3 / 820804 AraportID:AT3G15620 Length:556 Species:Arabidopsis thaliana


Alignment Length:546 Identity:254/546 - (46%)
Similarity:345/546 - (63%) Gaps:35/546 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPGILD---------WMQVGANRWRFLQQ 66
            |||||||:||||||.:      |:.|..|:.|:|::||..::         ..:.|.||.|||.:
plant    29 WFRKGLRVHDNPALEY------ASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRFLLE 87

  Fly    67 TLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGV 131
            :|:|||:.|:||.|||.|.:|:|.||..|..:.|:|:.|.||.|.:||....|..|:..|.:.||
plant    88 SLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVKDYASSTGV 152

  Fly   132 RVETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEKLKN------MPTPPKD 190
            .|.:..|||::||..:|.||.||.|::||.||         ||.|.|...|:      ...||..
plant   153 EVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFL---------KVAGEPSCAKSELVMSYSSLPPIG 208

  Fly   191 EVEQKDSAAYDCPTMKQL-VKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNTAPNS- 253
            ::  .:....:.|::::| .|..|:.....|.|||:|||:|:.:|:.|:.|||.||||...|:: 
plant   209 DI--GNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAF 271

  Fly   254 LEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTVAAAEPNFDR 318
            |:|:|||:||||||||||:|.|.|.|:.|.|...||:.|||||:|||:||||:||.|...||||:
plant   272 LKPATTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDK 336

  Fly   319 MLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWIS 383
            |.||..|.||||.|....|.||..|:||||:|||||.||.:.||:||||||.||||||||||:|.
plant   337 MKGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIH 401

  Fly   384 WEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSK 448
            ||:|:.|||:||:|.|||:|.|||||||.|:||:|:.|:|||::||||.||.|.|||.::|.|..
plant   402 WEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKD 466

  Fly   449 YPAGCIYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVRTGKEEESS 513
            .|...|||||.|.|..|....|::|.|||..:|.|:...||..::||.||.:|::: .||.:|.:
plant   467 MPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYALNKKM-DGKVDEEN 530

  Fly   514 FEEKSETSTSGKRKVRRATGSAPKRK 539
            ..:........:.:..:.....||.|
plant   531 LRDLRRKLQKDEHEESKIRNQRPKLK 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phr6-4NP_001260632.1 PhrB 5..499 CDD:223492 246/504 (49%)
FAD_binding_7 297..496 CDD:377037 116/198 (59%)
UVR3NP_566520.1 PhrB 26..510 CDD:223492 243/497 (49%)
DNA_photolyase 26..185 CDD:279247 71/170 (42%)
FAD_binding_7 240..514 CDD:281440 160/273 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 260 1.000 Domainoid score I484
eggNOG 1 0.900 - - E1_COG0415
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101154
Inparanoid 1 1.050 492 1.000 Inparanoid score I325
OMA 1 1.010 - - QHG63905
OrthoDB 1 1.010 - - D378952at2759
OrthoFinder 1 1.000 - - FOG0000663
OrthoInspector 1 1.000 - - oto3940
orthoMCL 1 0.900 - - OOG6_100453
Panther 1 1.100 - - LDO PTHR11455
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X403
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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