DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phr6-4 and CRY2

DIOPT Version :9

Sequence 1:NP_001260632.1 Gene:phr6-4 / 35322 FlyBaseID:FBgn0016054 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_066940.3 Gene:CRY2 / 1408 HGNCID:2385 Length:593 Species:Homo sapiens


Alignment Length:556 Identity:278/556 - (50%)
Similarity:362/556 - (65%) Gaps:31/556 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPGILDWMQVGANRWRFLQQ 66
            ||..|  ||||||||||||||||      ..|..|...||.::||||.......||.||||||.|
Human    20 DSASS--VHWFRKGLRLHDNPAL------LAAVRGARCVRCVYILDPWFAASSSVGINRWRFLLQ 76

  Fly    67 TLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGV 131
            :|||||..|||||||||||||:||:||||:||.|.|..||||.|.||:...||||:.|:||..||
Human    77 SLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 141

  Fly   132 RVETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKV---LGVPEKLKNMPTPPKDEVE 193
            .|.|..|||:|:.:.:|..|..|.|:||::|..|:.::::||.   |...:::::.    :.|::
Human   142 EVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESC----RAEIQ 202

  Fly   194 QKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNTAPNSLEPST 258
            :.....|..|::::|....|.|||..:.|||||||.|:::.|:.:.|||.:|:|....|||..|.
Human   203 ENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASP 267

  Fly   259 TVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTVAAAEPNFDRMLGNV 323
            |.|||||:|||||.|||..:|.::.|:..::|.||:||.|||:||||:||.|...|.||||.||.
Human   268 TGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNP 332

  Fly   324 YCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQ 388
            .|:||||..:|:.|..|..|:||:|:|||||.||||||||||||||||||||||||||:|||.|.
Human   333 ICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGV 397

  Fly   389 RVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGC 453
            |||::||||.|:::|||:|||||.||||.|:|..|.||.||::|||.|.|||:|:|:|..:|:..
Human   398 RVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRY 462

  Fly   454 IYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVR------------- 505
            |||||.|....|:|..|::|.|||..||.|....:.||:||...|:.....|             
Human   463 IYEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSRYRGLCLLASVPSCVE 527

  Fly   506 --TGKEEESSFEEKSETSTSGKRKVRRATGSAPKRK 539
              :....|.|..:....|::|.|.:.....| ||||
Human   528 DLSHPVAEPSSSQAGSMSSAGPRPLPSGPAS-PKRK 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phr6-4NP_001260632.1 PhrB 5..499 CDD:223492 264/496 (53%)
FAD_binding_7 297..496 CDD:377037 122/198 (62%)
CRY2NP_066940.3 PhrB 22..510 CDD:223492 265/499 (53%)
FAD_binding_7 307..505 CDD:308829 122/197 (62%)
Required for inhibition of CLOCK-ARNTL-mediated transcription. /evidence=ECO:0000250|UniProtKB:Q9R194 390..489 56/98 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..593 10/32 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 282 1.000 Domainoid score I1663
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 545 1.000 Inparanoid score I1165
Isobase 1 0.950 - 0.878984 Normalized mean entropy S3590
OMA 1 1.010 - - QHG63905
OrthoDB 1 1.010 - - D378952at2759
OrthoFinder 1 1.000 - - FOG0000663
OrthoInspector 1 1.000 - - otm40565
orthoMCL 1 0.900 - - OOG6_100453
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2229
SonicParanoid 1 1.000 - - X403
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.860

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