DRSC/TRiP Functional Genomics Resources

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Protein Alignment phr6-4 and cry1a

DIOPT Version :10

Sequence 1:NP_477188.1 Gene:phr6-4 / 35322 FlyBaseID:FBgn0016054 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001070765.2 Gene:cry1a / 100003956 ZFINID:ZDB-GENE-010426-2 Length:619 Species:Danio rerio


Alignment Length:494 Identity:258/494 - (52%)
Similarity:339/494 - (68%) Gaps:13/494 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPGILDWMQVGANRWRFLQQTLEDLDN 73
            ||||||||||||||:|      .::..|.:.||.::||||.......||.:|||||.|.|||||.
Zfish     6 VHWFRKGLRLHDNPSL------RDSILGAHSVRCVYILDPWFAGSSNVGISRWRFLLQCLEDLDA 64

  Fly    74 QLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCS 138
            .||||||||||:||:|.:||||:||.|.:..|::|.|.||:...||||::|||...||.|....|
Zfish    65 SLRKLNSRLFVIRGQPTDVFPRLFKEWNINRLSYEYDSEPFGKERDAAIKKLANEAGVEVIVRIS 129

  Fly   139 HTIYNPELVIAKNLGKAPITYQKFLGIV---EQLKVPKVLGVPEKLKNMPTPPKDEVEQKDSAAY 200
            ||:|:.:.:|..|.|::|:||::|..::   |.::.|......|.:....||..|:.::|    :
Zfish   130 HTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVETPAETITAEVMGPCTTPLSDDHDEK----F 190

  Fly   201 DCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNTAPNSLEPSTTVLSPYL 265
            ..|::::|....|.|....:||||||||.|:|..|:.:.|||.||:|....|||..|.|.|||||
Zfish   191 GVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYL 255

  Fly   266 KFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTVAAAEPNFDRMLGNVYCMQIPW 330
            :|||||.|||..||.::.::..|:|.||:||.|||:||||:||.|...|.||:|.||..|:||||
Zfish   256 RFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW 320

  Fly   331 QEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRVFEQLL 395
            .::|:.|..|..||||:|:|||||.||||||||||||||||||||||||||||||||.:|||:||
Zfish   321 DKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELL 385

  Fly   396 LDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGCIYEPWKA 460
            ||.||::|||:|||||.|:||.|:|..|.||:||::|||.|.|||:|:|.|..:||..||:||.|
Zfish   386 LDADWSVNAGSWMWLSCSSFFQQFFHCYCPVSFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450

  Fly   461 SLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYK 499
            ....|:|..|::|..||..:|.|....:.||:||...|:
Zfish   451 PESVQKAAKCIIGVHYPMPMVHHAEASRLNIERMKQIYQ 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phr6-4NP_477188.1 PhrB 6..497 CDD:440184 257/490 (52%)
cry1aNP_001070765.2 PhrB 5..487 CDD:440184 257/490 (52%)

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