DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2493 and pcp-4

DIOPT Version :10

Sequence 1:NP_610037.1 Gene:CG2493 / 35316 FlyBaseID:FBgn0032864 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_507841.1 Gene:pcp-4 / 180301 WormBaseID:WBGene00003959 Length:1042 Species:Caenorhabditis elegans


Alignment Length:462 Identity:113/462 - (24%)
Similarity:187/462 - (40%) Gaps:61/462 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LDHFSFLINATFNIRYLYNDSFVDKSNARTPIFFYTGNEG--DIELFAQNTGFLWEQAERQRALV 106
            |||||......|..:|.|.:. :..||.:. .|.|...||  :|.:.......:.:.|:|..|.:
 Worm    48 LDHFSNDSQVFFTQQYFYTER-LSVSNQKV-AFLYVNTEGNEEIAVMTDERSPVVKAAKRFGAQL 110

  Fly   107 IFAEHRYYGKSLPFGSSTFNTSLPEHLAYFTVEQTLEDYAMLITFLRNDRQMPV----VAFGGSY 167
            ...:|||||.|.| ....|:.|.   |.|.|..|.::|....|.:......|..    |.:|..|
 Worm   111 FALKHRYYGASKP-NFQNFDASA---LRYLTSRQAIQDILSFIKYANTQFNMNPDVRWVLWGTGY 171

  Fly   168 GGMLAAWFRMKYPHLVNGALAASAPVLQFPGITDCDIFYRIVTSVFQNAYNENCTLNIAKSWKLF 232
            ||:|||..|...|..|:||:::|||:.:   :.|...|...|.:........||...:.:.:...
 Worm   172 GGILAAEARKTDPVAVSGAISSSAPLRR---LYDFWQFNDFVGNTLMQIGGSNCYGRVQQGFADI 233

  Fly   233 ETLGASEAGKKQISDAFHLCNALKND----DDLKKFLDYVEEVYSNLAMVNYPYNSSFLAPLPAY 293
            .....:.||:.||||.|.|...|...    :|::.|...:...:..:...|..:|.|        
 Worm   234 RQAMKTTAGRSQISDLFQLNPRLDQTQLGYNDIQMFYTAIIGPFQEIVQFNNDFNIS-------- 290

  Fly   294 PVRQVCYYLKELHSTDADLLHAMSSALAVYTNYTQSAKCLDIS-----VNSNADDS--------- 344
             :..:|..:.....|:.:::.  .:.:.:.|..|.|.:.:.|:     ||...:||         
 Worm   291 -ITDMCTIIANSSWTNMEVVR--QAYVYLSTTLTGSVQPMTIASYQKVVNDLKNDSVSSPFVENR 352

  Fly   345 GWNIQSCNQM-VMPICSNGSETMF----RTSSWNFKDYAEKC---YKNYRLTPKPY-DIILRYGG 400
            .|..|.|.:: ..|..:|..:.:|    .||.     |..:|   :.:..||.... |.|:  ..
 Worm   353 MWTYQICTELGWFPTTNNNEQGLFGAVVPTSI-----YINQCSDIFPDASLTATSIRDSIV--SS 410

  Fly   401 RNLEAATNIIFSNGLLDPWSGGGVLQAPNDKVFVIILPEGAHHLDLRHSDPADPPSVRDARDKEA 465
            .::...||::|:||..||||..|...:.:..|...::| ||.:|.......:|...::.|.|...
 Worm   411 DSVYTGTNVVFTNGFYDPWSVLGQETSRDFSVVAYVIP-GASYLSDFFPGDSDNQYIQKAHDLMI 474

  Fly   466 AIIARWI 472
            ..|..|:
 Worm   475 ENINIWV 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2493NP_610037.1 alpha/beta hydrolases 43..464 CDD:473884 111/452 (25%)
pcp-4NP_507841.1 alpha/beta hydrolases 46..473 CDD:473884 111/452 (25%)
Peptidase_S28 552..980 CDD:310284
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.