DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc23 and CG31687

DIOPT Version :9

Sequence 1:NP_001260629.1 Gene:Cdc23 / 35315 FlyBaseID:FBgn0032863 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001163022.1 Gene:CG31687 / 318886 FlyBaseID:FBgn0051687 Length:351 Species:Drosophila melanogaster


Alignment Length:351 Identity:349/351 - (99%)
Similarity:349/351 - (99%) Gaps:1/351 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAMQKFFSVLLPDVKRELRRGIIECSKRGLLHSTKWLAEMHHGLADVHIDNEAPDEDRTFSECQL 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MAMQKFFSVLLPDVKRELRRGIIECSKRGLLHSTKWLAEMHHGLADVHIDNEAPDEDRTFSECQL 65

  Fly    66 EGIAPEEYSDYFLAKSYYDVREYDRAAHAVRNCESSVPRFLHFYSSYMAREKRRLDSTTDQANLH 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 EGIAPEEYSDYFLAKSYYDVREYDRAAHAVRNCESSVPRFLHFYSSYMAREKRRLDSTTDQANLH 130

  Fly   131 EPNQMRDLADLLATLRMEYGKSRLDGYGIYLYGVVLKALNLNQAAEQMLVQAIRLVPMLWSAYLE 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 EPNQMRDLADLLATLRMEYGKSRLDGYGIYLYGVVLKALNLNQAAEQMLVQAIRLVPMLWSAYLE 195

  Fly   196 LSPLIMEKKKLLSLQLGGHWMRHFFMAHTYLELYLNDDGLKIYEDLQASGFSKSIYLIAQMALVY 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 LSPLIMEKKKLLSLQLGGHWMRHFFMAHTYLELYLNDDGLKIYEDLQASGFSKSIYLIAQMALVY 260

  Fly   261 HNKRDVDKAIELYQALLES-DPYRLDNVDTYSNLLFVKEMKTEMAQLAHKAVSINKYRPETCCVI 324
            ||||||||||||||||||| .||||||||||||||||||||||||||||||||||||||||||||
  Fly   261 HNKRDVDKAIELYQALLESASPYRLDNVDTYSNLLFVKEMKTEMAQLAHKAVSINKYRPETCCVI 325

  Fly   325 GNYYSIRCDHQVAISYFQRALKLNPK 350
            ||||||||||||||||||||||||||
  Fly   326 GNYYSIRCDHQVAISYFQRALKLNPK 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc23NP_001260629.1 ANAPC8 11..119 CDD:281973 107/107 (100%)
TPR 235..507 CDD:223533 115/117 (98%)
TPR repeat 255..278 CDD:276809 22/22 (100%)
TPR repeat 318..346 CDD:276809 27/27 (100%)
TPR repeat 351..381 CDD:276809 349/351 (99%)
TPR repeat 386..414 CDD:276809
TPR repeat 420..448 CDD:276809
TPR repeat 454..477 CDD:276809
TPR repeat 494..522 CDD:276809
CG31687NP_001163022.1 ANAPC8 11..119 CDD:281973 107/107 (100%)
TPR repeat 255..278 CDD:276809 22/22 (100%)
TPR repeat 287..314 CDD:276809 26/26 (100%)
TPR repeat 319..347 CDD:276809 27/27 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449291
Domainoid 1 1.000 76 1.000 Domainoid score I3155
eggNOG 1 0.900 - - E1_COG0013
Homologene 1 1.000 - - H3426
Inparanoid 1 1.050 374 1.000 Inparanoid score I554
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143997at33208
OrthoFinder 1 1.000 - - FOG0003812
OrthoInspector 1 1.000 - - otm26303
orthoMCL 1 0.900 - - OOG6_102790
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2656
1110.700

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