DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc23 and Aars

DIOPT Version :9

Sequence 1:NP_001260629.1 Gene:Cdc23 / 35315 FlyBaseID:FBgn0032863 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_666329.2 Gene:Aars / 234734 MGIID:2384560 Length:968 Species:Mus musculus


Alignment Length:433 Identity:89/433 - (20%)
Similarity:149/433 - (34%) Gaps:119/433 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 IAQMALVYHNKR---DVDKAIELYQALLE---SDPYR-------LDNVDTYSNLLFVKEMKTEMA 304
            :.::..|..||.   |.|..:..::|:.:   :.||.       .|.:|....:| ....:|...
Mouse   244 LERLVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVL-ADHARTITV 307

  Fly   305 QLAHKAVSINKYRPETCCVIGNYYSIRCDHQVAISYFQRALKLNPKYLAAWTL-------MGHEF 362
            .||...      ||:.   .|..|.:|...:.|:.|....|..:..:.|  ||       :|..|
Mouse   308 ALADGG------RPDN---TGRGYVLRRILRRAVRYSHEKLNASRGFFA--TLVDVVVQSLGDAF 361

  Fly   363 MELKNTNAAIQSYRKAVEVNKRDYRAWYGLGQAYEIIKMHYYSLYYFKIAHQLRPYDSRMLVALG 427
            .|||.....::..     :|:.:.:....|.:...|:.....||...|..    |.|:..|  |.
Mouse   362 PELKKDPEMVKDI-----INEEEVQFLKTLSRGRRILDRKIQSLGDCKTI----PGDTAWL--LY 415

  Fly   428 ETYE-KLDKCENAVKCYWKAIDVGDIEGIAMYKLANLHEK---LGDHETAVHCYIMYCEDERA-- 486
            :||. .:|......:.....:|:...|  ...:||.|..:   .|| |..:...|...|:.||  
Mouse   416 DTYGFPVDLTGLIAEEKGLVVDMNGFE--EERRLAQLKSQGKGAGD-EDLIMLDIYAIEELRAKG 477

  Fly   487 --ATDKQSLYQGFITLANYYEKKGEYERAAYYAYKC--------------LDSEDRKMEAKALL- 534
              |||....|       ||     :.:.:..|.::|              :|......|...:| 
Mouse   478 LEATDDSPKY-------NY-----QSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLD 530

  Fly   535 KTIDWKRNAEGQKKVKTSTAVANADTSSEDEMEWELQDVRV------------------------ 575
            ||..:   ||...::.....:...|.||||:.|:.:::.:|                        
Mouse   531 KTCFY---AEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKVGDQVRLF 592

  Fly   576 -----RVPITSIATTT----TSTTTVAAESASSSSLISLRPDR 609
                 |.|:.|..|.|    .:..:|..|:....||::  |||
Mouse   593 IDEPRRRPVMSNHTATHILNFALRSVLGEADQKGSLVA--PDR 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc23NP_001260629.1 ANAPC8 11..119 CDD:281973
TPR 235..507 CDD:223533 61/281 (22%)
TPR repeat 255..278 CDD:276809 6/25 (24%)
TPR repeat 318..346 CDD:276809 6/27 (22%)
TPR repeat 351..381 CDD:276809 8/36 (22%)
TPR repeat 386..414 CDD:276809 5/27 (19%)
TPR repeat 420..448 CDD:276809 5/28 (18%)
TPR repeat 454..477 CDD:276809 6/25 (24%)
TPR repeat 494..522 CDD:276809 5/41 (12%)
AarsNP_666329.2 PLN02900 6..961 CDD:215487 89/433 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0013
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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