DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arpc2 and ARC35

DIOPT Version :10

Sequence 1:NP_610033.1 Gene:Arpc2 / 35311 FlyBaseID:FBgn0032859 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_014433.1 Gene:ARC35 / 855771 SGDID:S000005318 Length:342 Species:Saccharomyces cerevisiae


Alignment Length:349 Identity:126/349 - (36%)
Similarity:185/349 - (53%) Gaps:65/349 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MILLEINNRIIEETLLVKYRNAQAGLKPESIDIRIADFDGVLYHISNVNGDKTKVRISISLKFYK 65
            |:.|:..|.:|::||.......:.| .|.::|..::|||...|||||...||:.:.:|:..|.:.
Yeast     1 MLHLQPQNLLIQKTLNEAIEALRKG-SPLTMDRIVSDFDYTTYHISNTAEDKSILLLSVKTKAWV 64

  Fly    66 QLQE---HGADELLK---REYGSL-----LTDTEEGYNVSVLINLEEIPEDCEQIAKRIGLLKRN 119
            .:.|   .|:..|||   ..|.||     .::.|.||:.::.|.|.|:.:  |.|. ::.:||..
Yeast    65 SVSECQLDGSLTLLKFLADHYSSLGGVTIPSEVEPGYDYTLQITLAELVQ--ESIL-QLSVLKTI 126

  Fly   120 CFASVFE----KYFDYQEQ-----------GE---EGQKRA-VINYRNDETLYVEAKPDRVTVVF 165
            ..:..||    |:.:..:|           ||   .|.... .|.||::|.::::...||||::|
Yeast   127 ILSFPFELAISKFIELSQQQPAPVEAEITGGEVAANGDNTLFTIKYRDEENIFIKPSNDRVTIIF 191

  Fly   166 STIFRDEDDVIIGKVFMQEL---REGRRASHTAPQVLFSHREPPLEL---------ANTDARVGD 218
            .|||:||.|.|.||||:||.   |:..|...:|||||:|| ||||||         |....|   
Yeast   192 ETIFQDETDKIFGKVFLQEFVDARKRNRQIQSAPQVLYSH-EPPLELKRLYQPPKVAEQSRR--- 252

  Fly   219 NIGYVTFVLFPRH-TNKETRDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTSDFLKVLNRAR- 281
               ::|||||||| ..||.:.::|..:.:||:|.||||||||||:|||||.:...|:||||||: 
Yeast   253 ---FITFVLFPRHFQTKELQFHSICQLTLFRNYFHYHIKCSKAYMHSRMRFRVDSFIKVLNRAKV 314

  Fly   282 ----------PEPKNTEKKTITGR 295
                      .|.:...::|.|||
Yeast   315 DEDDENDELSAEGRQQARRTFTGR 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arpc2NP_610033.1 P34-Arc 57..284 CDD:461144 102/280 (36%)
ARC35NP_014433.1 P34-Arc 56..316 CDD:461144 102/269 (38%)

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